Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC11.99□□□□□ -0.49
NKX6-2Q9C056 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC11.99□□□□□ -0.49
NKX6-2Q9C056 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC11.99□□□□□ -0.49
NKX6-2Q9C056 EEF1DP4-201ENST00000446006 880 ntBASIC11.99□□□□□ -0.49
NKX6-2Q9C056 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
NKX6-2Q9C056 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC11.99□□□□□ -0.49
NKX6-2Q9C056 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
NKX6-2Q9C056 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
NKX6-2Q9C056 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
NKX6-2Q9C056 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC11.99□□□□□ -0.49
NKX6-2Q9C056 CD7-202ENST00000578509 925 ntTSL 3 BASIC11.99□□□□□ -0.49
NKX6-2Q9C056 AC073389.1-201ENST00000595595 795 ntBASIC11.99□□□□□ -0.49
NKX6-2Q9C056 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC11.99□□□□□ -0.49
NKX6-2Q9C056 KNDC1-202ENST00000368571 3925 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
NKX6-2Q9C056 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NKX6-2Q9C056 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NKX6-2Q9C056 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NKX6-2Q9C056 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
NKX6-2Q9C056 C19orf12-208ENST00000614091 4489 ntAPPRIS P1 TSL 4 BASIC11.99□□□□□ -0.49
NKX6-2Q9C056 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC11.99□□□□□ -0.49
NKX6-2Q9C056 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
NKX6-2Q9C056 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
NKX6-2Q9C056 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NKX6-2Q9C056 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
NKX6-2Q9C056 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NKX6-2Q9C056 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC11.99□□□□□ -0.49
NKX6-2Q9C056 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC11.99□□□□□ -0.49
NKX6-2Q9C056 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC11.99□□□□□ -0.49
NKX6-2Q9C056 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NKX6-2Q9C056 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
NKX6-2Q9C056 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
NKX6-2Q9C056 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC11.99□□□□□ -0.49
NKX6-2Q9C056 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
NKX6-2Q9C056 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
NKX6-2Q9C056 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC11.99□□□□□ -0.49
NKX6-2Q9C056 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
NKX6-2Q9C056 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
NKX6-2Q9C056 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
NKX6-2Q9C056 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC11.98□□□□□ -0.49
NKX6-2Q9C056 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NKX6-2Q9C056 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
NKX6-2Q9C056 ARL13B-210ENST00000535334 3906 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NKX6-2Q9C056 CACNG3-201ENST00000005284 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NKX6-2Q9C056 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NKX6-2Q9C056 AGAP10P-201ENST00000454844 2418 ntBASIC11.98□□□□□ -0.49
NKX6-2Q9C056 TGM7-201ENST00000452443 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NKX6-2Q9C056 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
NKX6-2Q9C056 C2-209ENST00000452323 1999 ntTSL 2 BASIC11.98□□□□□ -0.49
NKX6-2Q9C056 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NKX6-2Q9C056 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC11.98□□□□□ -0.49
NKX6-2Q9C056 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC11.98□□□□□ -0.49
NKX6-2Q9C056 AC004834.1-202ENST00000638785 1737 ntTSL 5 BASIC11.98□□□□□ -0.49
NKX6-2Q9C056 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
NKX6-2Q9C056 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
NKX6-2Q9C056 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC11.98□□□□□ -0.49
NKX6-2Q9C056 AC084364.1-201ENST00000551967 1556 ntBASIC11.98□□□□□ -0.49
NKX6-2Q9C056 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC11.98□□□□□ -0.49
NKX6-2Q9C056 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NKX6-2Q9C056 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
NKX6-2Q9C056 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NKX6-2Q9C056 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NKX6-2Q9C056 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NKX6-2Q9C056 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NKX6-2Q9C056 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NKX6-2Q9C056 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC11.98□□□□□ -0.49
NKX6-2Q9C056 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC11.98□□□□□ -0.49
NKX6-2Q9C056 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC11.98□□□□□ -0.49
NKX6-2Q9C056 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC11.98□□□□□ -0.49
NKX6-2Q9C056 AL139010.1-201ENST00000454878 894 ntBASIC11.98□□□□□ -0.49
NKX6-2Q9C056 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NKX6-2Q9C056 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC11.98□□□□□ -0.49
NKX6-2Q9C056 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC11.98□□□□□ -0.49
NKX6-2Q9C056 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC11.98□□□□□ -0.49
NKX6-2Q9C056 PAM16-208ENST00000573553 722 ntTSL 2 BASIC11.98□□□□□ -0.49
NKX6-2Q9C056 MIR4751-201ENST00000578027 74 ntBASIC11.98□□□□□ -0.49
NKX6-2Q9C056 MIR3652-201ENST00000579335 131 ntBASIC11.98□□□□□ -0.49
NKX6-2Q9C056 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC11.98□□□□□ -0.49
NKX6-2Q9C056 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC11.98□□□□□ -0.49
NKX6-2Q9C056 AC066615.1-201ENST00000640911 628 ntBASIC11.98□□□□□ -0.49
NKX6-2Q9C056 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NKX6-2Q9C056 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NKX6-2Q9C056 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NKX6-2Q9C056 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
NKX6-2Q9C056 LINC01993-201ENST00000374945 2934 ntTSL 2 BASIC11.98□□□□□ -0.49
NKX6-2Q9C056 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
NKX6-2Q9C056 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NKX6-2Q9C056 FANCC-210ENST00000490972 2709 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NKX6-2Q9C056 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
NKX6-2Q9C056 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NKX6-2Q9C056 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC11.98□□□□□ -0.49
NKX6-2Q9C056 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
NKX6-2Q9C056 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC11.98□□□□□ -0.49
NKX6-2Q9C056 OFD1-203ENST00000380567 3736 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
NKX6-2Q9C056 PTPRN-202ENST00000409251 3622 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NKX6-2Q9C056 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
NKX6-2Q9C056 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NKX6-2Q9C056 MED24-204ENST00000394128 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NKX6-2Q9C056 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC11.98□□□□□ -0.49
NKX6-2Q9C056 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NKX6-2Q9C056 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms