Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC14.92□□□□□ -0.02
TRIM4Q9C037 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.92□□□□□ -0.02
TRIM4Q9C037 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM4Q9C037 NUTM2HP-201ENST00000442076 2498 ntBASIC14.92□□□□□ -0.02
TRIM4Q9C037 AC092135.3-201ENST00000624151 1846 ntBASIC14.92□□□□□ -0.02
TRIM4Q9C037 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM4Q9C037 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM4Q9C037 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM4Q9C037 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
TRIM4Q9C037 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.92□□□□□ -0.02
TRIM4Q9C037 C2-206ENST00000442278 2434 ntTSL 2 BASIC14.92□□□□□ -0.02
TRIM4Q9C037 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM4Q9C037 APOC3-202ENST00000375345 604 ntTSL 5 BASIC14.92□□□□□ -0.02
TRIM4Q9C037 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM4Q9C037 AC005229.1-201ENST00000392885 409 ntBASIC14.92□□□□□ -0.02
TRIM4Q9C037 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM4Q9C037 AZGP1P1-201ENST00000411909 902 ntBASIC14.92□□□□□ -0.02
TRIM4Q9C037 AC098850.1-201ENST00000419919 790 ntBASIC14.92□□□□□ -0.02
TRIM4Q9C037 HIST3H2BA-201ENST00000436555 524 ntBASIC14.92□□□□□ -0.02
TRIM4Q9C037 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.92□□□□□ -0.02
TRIM4Q9C037 AL355994.2-201ENST00000447882 704 ntBASIC14.92□□□□□ -0.02
TRIM4Q9C037 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.92□□□□□ -0.02
TRIM4Q9C037 CTBP2P5-201ENST00000454986 1264 ntBASIC14.92□□□□□ -0.02
TRIM4Q9C037 AC108725.1-201ENST00000495472 409 ntBASIC14.92□□□□□ -0.02
TRIM4Q9C037 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.92□□□□□ -0.02
TRIM4Q9C037 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC14.92□□□□□ -0.02
TRIM4Q9C037 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TRIM4Q9C037 AL512361.1-201ENST00000554200 418 ntBASIC14.92□□□□□ -0.02
TRIM4Q9C037 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
TRIM4Q9C037 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14.92□□□□□ -0.02
TRIM4Q9C037 AC105021.1-202ENST00000570572 669 ntBASIC14.92□□□□□ -0.02
TRIM4Q9C037 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.92□□□□□ -0.02
TRIM4Q9C037 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.92□□□□□ -0.02
TRIM4Q9C037 MIR6727-201ENST00000620702 65 ntBASIC14.92□□□□□ -0.02
TRIM4Q9C037 PPA1-206ENST00000625364 644 ntTSL 5 BASIC14.92□□□□□ -0.02
TRIM4Q9C037 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM4Q9C037 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TRIM4Q9C037 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.92□□□□□ -0.02
TRIM4Q9C037 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
TRIM4Q9C037 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC14.92□□□□□ -0.02
TRIM4Q9C037 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TRIM4Q9C037 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM4Q9C037 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
TRIM4Q9C037 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM4Q9C037 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC14.92□□□□□ -0.02
TRIM4Q9C037 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM4Q9C037 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM4Q9C037 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
TRIM4Q9C037 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM4Q9C037 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.92□□□□□ -0.02
TRIM4Q9C037 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.92□□□□□ -0.02
TRIM4Q9C037 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TRIM4Q9C037 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM4Q9C037 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM4Q9C037 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.92□□□□□ -0.02
TRIM4Q9C037 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.92□□□□□ -0.02
TRIM4Q9C037 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM4Q9C037 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.92□□□□□ -0.02
TRIM4Q9C037 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM4Q9C037 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM4Q9C037 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM4Q9C037 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.91□□□□□ -0.02
TRIM4Q9C037 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM4Q9C037 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.91□□□□□ -0.02
TRIM4Q9C037 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
TRIM4Q9C037 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM4Q9C037 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM4Q9C037 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
TRIM4Q9C037 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM4Q9C037 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM4Q9C037 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM4Q9C037 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.91□□□□□ -0.02
TRIM4Q9C037 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
TRIM4Q9C037 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM4Q9C037 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.91□□□□□ -0.02
TRIM4Q9C037 AC136604.1-201ENST00000418535 575 ntBASIC14.91□□□□□ -0.02
TRIM4Q9C037 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.91□□□□□ -0.02
TRIM4Q9C037 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.91□□□□□ -0.02
TRIM4Q9C037 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC14.91□□□□□ -0.02
TRIM4Q9C037 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM4Q9C037 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM4Q9C037 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.91□□□□□ -0.02
TRIM4Q9C037 AC023310.3-201ENST00000557027 670 ntBASIC14.91□□□□□ -0.02
TRIM4Q9C037 AC100756.1-201ENST00000562736 682 ntBASIC14.91□□□□□ -0.02
TRIM4Q9C037 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.91□□□□□ -0.02
TRIM4Q9C037 AC138749.3-201ENST00000567691 622 ntBASIC14.91□□□□□ -0.02
TRIM4Q9C037 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM4Q9C037 AC116165.1-201ENST00000611806 668 ntBASIC14.91□□□□□ -0.02
TRIM4Q9C037 WFDC1-204ENST00000613603 549 ntBASIC14.91□□□□□ -0.02
TRIM4Q9C037 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM4Q9C037 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC14.91□□□□□ -0.02
TRIM4Q9C037 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM4Q9C037 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM4Q9C037 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.91□□□□□ -0.02
TRIM4Q9C037 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
TRIM4Q9C037 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM4Q9C037 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.91□□□□□ -0.02
TRIM4Q9C037 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.91□□□□□ -0.02
TRIM4Q9C037 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM4Q9C037 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms