Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
PAAF1Q9BRP4 NEU3-205ENST00000531619 582 ntTSL 5 BASIC15.58■□□□□ 0.08
PAAF1Q9BRP4 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC15.58■□□□□ 0.08
PAAF1Q9BRP4 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC15.58■□□□□ 0.08
PAAF1Q9BRP4 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC15.58■□□□□ 0.08
PAAF1Q9BRP4 MIR5572-201ENST00000583188 137 ntBASIC15.58■□□□□ 0.08
PAAF1Q9BRP4 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC15.58■□□□□ 0.08
PAAF1Q9BRP4 AC018635.2-201ENST00000608625 364 ntBASIC15.58■□□□□ 0.08
PAAF1Q9BRP4 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
PAAF1Q9BRP4 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PAAF1Q9BRP4 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
PAAF1Q9BRP4 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
PAAF1Q9BRP4 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.58■□□□□ 0.08
PAAF1Q9BRP4 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PAAF1Q9BRP4 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PAAF1Q9BRP4 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PAAF1Q9BRP4 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PAAF1Q9BRP4 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PAAF1Q9BRP4 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
PAAF1Q9BRP4 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PAAF1Q9BRP4 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PAAF1Q9BRP4 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.57■□□□□ 0.08
PAAF1Q9BRP4 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PAAF1Q9BRP4 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PAAF1Q9BRP4 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
PAAF1Q9BRP4 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PAAF1Q9BRP4 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PAAF1Q9BRP4 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
PAAF1Q9BRP4 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PAAF1Q9BRP4 MBP-201ENST00000354542 575 ntTSL 2 BASIC15.57■□□□□ 0.08
PAAF1Q9BRP4 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC15.57■□□□□ 0.08
PAAF1Q9BRP4 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC15.57■□□□□ 0.08
PAAF1Q9BRP4 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC15.57■□□□□ 0.08
PAAF1Q9BRP4 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC15.57■□□□□ 0.08
PAAF1Q9BRP4 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC15.57■□□□□ 0.08
PAAF1Q9BRP4 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC15.57■□□□□ 0.08
PAAF1Q9BRP4 AC027237.1-201ENST00000560942 655 ntBASIC15.57■□□□□ 0.08
PAAF1Q9BRP4 MIR3147-201ENST00000577811 66 ntBASIC15.57■□□□□ 0.08
PAAF1Q9BRP4 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
PAAF1Q9BRP4 WDR7-208ENST00000589935 544 ntTSL 4 BASIC15.57■□□□□ 0.08
PAAF1Q9BRP4 LINC01783-202ENST00000614408 828 ntBASIC15.57■□□□□ 0.08
PAAF1Q9BRP4 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC15.57■□□□□ 0.08
PAAF1Q9BRP4 AC103691.2-201ENST00000618824 433 ntBASIC15.57■□□□□ 0.08
PAAF1Q9BRP4 BX284668.2-205ENST00000619677 828 ntBASIC15.57■□□□□ 0.08
PAAF1Q9BRP4 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC15.57■□□□□ 0.08
PAAF1Q9BRP4 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC15.57■□□□□ 0.08
PAAF1Q9BRP4 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PAAF1Q9BRP4 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PAAF1Q9BRP4 FAM90A2P-201ENST00000511144 1395 ntBASIC15.57■□□□□ 0.08
PAAF1Q9BRP4 FAM90A25P-201ENST00000528404 1395 ntBASIC15.57■□□□□ 0.08
PAAF1Q9BRP4 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PAAF1Q9BRP4 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC15.57■□□□□ 0.08
PAAF1Q9BRP4 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PAAF1Q9BRP4 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC15.57■□□□□ 0.08
PAAF1Q9BRP4 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PAAF1Q9BRP4 AP002353.1-201ENST00000528257 1599 ntBASIC15.57■□□□□ 0.08
PAAF1Q9BRP4 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC15.57■□□□□ 0.08
PAAF1Q9BRP4 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PAAF1Q9BRP4 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
PAAF1Q9BRP4 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC15.57■□□□□ 0.08
PAAF1Q9BRP4 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
PAAF1Q9BRP4 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PAAF1Q9BRP4 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PAAF1Q9BRP4 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
PAAF1Q9BRP4 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC15.56■□□□□ 0.08
PAAF1Q9BRP4 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
PAAF1Q9BRP4 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.56■□□□□ 0.08
PAAF1Q9BRP4 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PAAF1Q9BRP4 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PAAF1Q9BRP4 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PAAF1Q9BRP4 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PAAF1Q9BRP4 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PAAF1Q9BRP4 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.56■□□□□ 0.08
PAAF1Q9BRP4 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PAAF1Q9BRP4 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PAAF1Q9BRP4 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PAAF1Q9BRP4 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
PAAF1Q9BRP4 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PAAF1Q9BRP4 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PAAF1Q9BRP4 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
PAAF1Q9BRP4 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC15.56■□□□□ 0.08
PAAF1Q9BRP4 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC15.56■□□□□ 0.08
PAAF1Q9BRP4 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PAAF1Q9BRP4 MPRIPP1-201ENST00000452433 1089 ntBASIC15.56■□□□□ 0.08
PAAF1Q9BRP4 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC15.56■□□□□ 0.08
PAAF1Q9BRP4 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PAAF1Q9BRP4 CD164-210ENST00000512821 964 ntTSL 2 BASIC15.56■□□□□ 0.08
PAAF1Q9BRP4 LY6E-208ENST00000520531 490 ntTSL 2 BASIC15.56■□□□□ 0.08
PAAF1Q9BRP4 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PAAF1Q9BRP4 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC15.56■□□□□ 0.08
PAAF1Q9BRP4 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC15.56■□□□□ 0.08
PAAF1Q9BRP4 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC15.56■□□□□ 0.08
PAAF1Q9BRP4 NAT9-220ENST00000582870 896 ntTSL 5 BASIC15.56■□□□□ 0.08
PAAF1Q9BRP4 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC15.56■□□□□ 0.08
PAAF1Q9BRP4 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC15.56■□□□□ 0.08
PAAF1Q9BRP4 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC15.56■□□□□ 0.08
PAAF1Q9BRP4 AL022334.2-201ENST00000610000 484 ntBASIC15.56■□□□□ 0.08
PAAF1Q9BRP4 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC15.56■□□□□ 0.08
PAAF1Q9BRP4 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC15.56■□□□□ 0.08
PAAF1Q9BRP4 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms