Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.53□□□□□ -0.24
SNX18Q96RF0 MTHFR-210ENST00000641407 2387 ntBASIC13.53□□□□□ -0.24
SNX18Q96RF0 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SNX18Q96RF0 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNX18Q96RF0 AC018529.2-202ENST00000611482 3087 ntBASIC13.53□□□□□ -0.24
SNX18Q96RF0 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC13.53□□□□□ -0.24
SNX18Q96RF0 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
SNX18Q96RF0 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNX18Q96RF0 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNX18Q96RF0 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
SNX18Q96RF0 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.53□□□□□ -0.24
SNX18Q96RF0 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
SNX18Q96RF0 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SNX18Q96RF0 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNX18Q96RF0 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNX18Q96RF0 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNX18Q96RF0 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SNX18Q96RF0 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNX18Q96RF0 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNX18Q96RF0 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNX18Q96RF0 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.53□□□□□ -0.24
SNX18Q96RF0 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
SNX18Q96RF0 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNX18Q96RF0 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC13.53□□□□□ -0.24
SNX18Q96RF0 GNAQP1-201ENST00000444815 1067 ntBASIC13.53□□□□□ -0.24
SNX18Q96RF0 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNX18Q96RF0 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.53□□□□□ -0.24
SNX18Q96RF0 AC099568.2-201ENST00000609194 695 ntBASIC13.53□□□□□ -0.24
SNX18Q96RF0 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNX18Q96RF0 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.53□□□□□ -0.24
SNX18Q96RF0 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC13.53□□□□□ -0.24
SNX18Q96RF0 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNX18Q96RF0 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
SNX18Q96RF0 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNX18Q96RF0 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNX18Q96RF0 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
SNX18Q96RF0 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.53□□□□□ -0.24
SNX18Q96RF0 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.53□□□□□ -0.24
SNX18Q96RF0 AC015802.1-201ENST00000588104 1449 ntBASIC13.53□□□□□ -0.24
SNX18Q96RF0 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC13.53□□□□□ -0.24
SNX18Q96RF0 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNX18Q96RF0 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC13.53□□□□□ -0.24
SNX18Q96RF0 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.53□□□□□ -0.24
SNX18Q96RF0 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
SNX18Q96RF0 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SNX18Q96RF0 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNX18Q96RF0 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNX18Q96RF0 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNX18Q96RF0 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNX18Q96RF0 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.53□□□□□ -0.24
SNX18Q96RF0 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SNX18Q96RF0 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNX18Q96RF0 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
SNX18Q96RF0 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.52□□□□□ -0.24
SNX18Q96RF0 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
SNX18Q96RF0 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SNX18Q96RF0 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SNX18Q96RF0 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.52□□□□□ -0.24
SNX18Q96RF0 AC130686.1-201ENST00000622936 2466 ntBASIC13.52□□□□□ -0.24
SNX18Q96RF0 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
SNX18Q96RF0 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.52□□□□□ -0.24
SNX18Q96RF0 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
SNX18Q96RF0 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC13.52□□□□□ -0.24
SNX18Q96RF0 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
SNX18Q96RF0 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
SNX18Q96RF0 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
SNX18Q96RF0 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC13.52□□□□□ -0.25
SNX18Q96RF0 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SNX18Q96RF0 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SNX18Q96RF0 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.52□□□□□ -0.25
SNX18Q96RF0 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.52□□□□□ -0.25
SNX18Q96RF0 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.52□□□□□ -0.25
SNX18Q96RF0 KRT17P7-201ENST00000451704 1104 ntBASIC13.52□□□□□ -0.25
SNX18Q96RF0 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.52□□□□□ -0.25
SNX18Q96RF0 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
SNX18Q96RF0 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.52□□□□□ -0.25
SNX18Q96RF0 TPRX2P-201ENST00000535362 881 ntBASIC13.52□□□□□ -0.25
SNX18Q96RF0 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC13.52□□□□□ -0.25
SNX18Q96RF0 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.52□□□□□ -0.25
SNX18Q96RF0 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC13.52□□□□□ -0.25
SNX18Q96RF0 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.52□□□□□ -0.25
SNX18Q96RF0 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.52□□□□□ -0.25
SNX18Q96RF0 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
SNX18Q96RF0 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.52□□□□□ -0.25
SNX18Q96RF0 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
SNX18Q96RF0 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
SNX18Q96RF0 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
SNX18Q96RF0 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
SNX18Q96RF0 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SNX18Q96RF0 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SNX18Q96RF0 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SNX18Q96RF0 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
SNX18Q96RF0 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
SNX18Q96RF0 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SNX18Q96RF0 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SNX18Q96RF0 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
SNX18Q96RF0 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SNX18Q96RF0 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
SNX18Q96RF0 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SNX18Q96RF0 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms