Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC11.25□□□□□ -0.61
AP1S3Q96PC3 SETDB2-203ENST00000354234 6139 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
AP1S3Q96PC3 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
AP1S3Q96PC3 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
AP1S3Q96PC3 TMEM136-202ENST00000375095 4143 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
AP1S3Q96PC3 AC005041.1-201ENST00000517883 7033 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
AP1S3Q96PC3 AL591122.2-201ENST00000624125 1853 ntBASIC11.25□□□□□ -0.61
AP1S3Q96PC3 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
AP1S3Q96PC3 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
AP1S3Q96PC3 CAMSAP2-202ENST00000358823 7352 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
AP1S3Q96PC3 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
AP1S3Q96PC3 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
AP1S3Q96PC3 LARP1-201ENST00000336314 6595 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
AP1S3Q96PC3 LGALS8-208ENST00000416919 6097 ntTSL 5 BASIC11.25□□□□□ -0.61
AP1S3Q96PC3 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
AP1S3Q96PC3 LRRC8A-201ENST00000259324 4619 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
AP1S3Q96PC3 IPO7-201ENST00000379719 6191 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
AP1S3Q96PC3 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC11.24□□□□□ -0.61
AP1S3Q96PC3 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
AP1S3Q96PC3 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
AP1S3Q96PC3 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
AP1S3Q96PC3 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
AP1S3Q96PC3 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC11.24□□□□□ -0.61
AP1S3Q96PC3 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
AP1S3Q96PC3 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
AP1S3Q96PC3 CXorf38-203ENST00000378426 4895 ntTSL 2 BASIC11.24□□□□□ -0.61
AP1S3Q96PC3 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC11.24□□□□□ -0.61
AP1S3Q96PC3 DAG1-218ENST00000515359 5576 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
AP1S3Q96PC3 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC11.24□□□□□ -0.61
AP1S3Q96PC3 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
AP1S3Q96PC3 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
AP1S3Q96PC3 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
AP1S3Q96PC3 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
AP1S3Q96PC3 NUTM2HP-201ENST00000442076 2498 ntBASIC11.24□□□□□ -0.61
AP1S3Q96PC3 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
AP1S3Q96PC3 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC11.24□□□□□ -0.61
AP1S3Q96PC3 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
AP1S3Q96PC3 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
AP1S3Q96PC3 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
AP1S3Q96PC3 PTMS-202ENST00000389462 773 ntTSL 2 BASIC11.24□□□□□ -0.61
AP1S3Q96PC3 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
AP1S3Q96PC3 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC11.24□□□□□ -0.61
AP1S3Q96PC3 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC11.24□□□□□ -0.61
AP1S3Q96PC3 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
AP1S3Q96PC3 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC11.24□□□□□ -0.61
AP1S3Q96PC3 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC11.24□□□□□ -0.61
AP1S3Q96PC3 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC11.24□□□□□ -0.61
AP1S3Q96PC3 AC034105.1-201ENST00000563488 319 ntBASIC11.24□□□□□ -0.61
AP1S3Q96PC3 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC11.24□□□□□ -0.61
AP1S3Q96PC3 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
AP1S3Q96PC3 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
AP1S3Q96PC3 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC11.24□□□□□ -0.61
AP1S3Q96PC3 AL513190.1-201ENST00000621254 727 ntBASIC11.24□□□□□ -0.61
AP1S3Q96PC3 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC11.24□□□□□ -0.61
AP1S3Q96PC3 SERF2-217ENST00000630046 862 ntTSL 5 BASIC11.24□□□□□ -0.61
AP1S3Q96PC3 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
AP1S3Q96PC3 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
AP1S3Q96PC3 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
AP1S3Q96PC3 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
AP1S3Q96PC3 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
AP1S3Q96PC3 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC11.24□□□□□ -0.61
AP1S3Q96PC3 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
AP1S3Q96PC3 GNG4-204ENST00000450593 4978 ntAPPRIS P1 TSL 4 BASIC11.24□□□□□ -0.61
AP1S3Q96PC3 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
AP1S3Q96PC3 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC11.24□□□□□ -0.61
AP1S3Q96PC3 AC012508.2-201ENST00000567613 1472 ntBASIC11.24□□□□□ -0.61
AP1S3Q96PC3 GOLGA3-202ENST00000450791 8870 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
AP1S3Q96PC3 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
AP1S3Q96PC3 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC11.24□□□□□ -0.61
AP1S3Q96PC3 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
AP1S3Q96PC3 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
AP1S3Q96PC3 FAM237B-201ENST00000637645 3877 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
AP1S3Q96PC3 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
AP1S3Q96PC3 VDR-202ENST00000395324 4762 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
AP1S3Q96PC3 PDXK-209ENST00000467908 7194 ntTSL 3 BASIC11.24□□□□□ -0.61
AP1S3Q96PC3 BAZ2A-201ENST00000379441 8831 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
AP1S3Q96PC3 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
AP1S3Q96PC3 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
AP1S3Q96PC3 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC11.24□□□□□ -0.61
AP1S3Q96PC3 WDR6-201ENST00000395474 4401 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
AP1S3Q96PC3 TMEM33-202ENST00000325094 6221 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
AP1S3Q96PC3 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC11.23□□□□□ -0.61
AP1S3Q96PC3 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC11.23□□□□□ -0.61
AP1S3Q96PC3 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC11.23□□□□□ -0.61
AP1S3Q96PC3 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
AP1S3Q96PC3 MYO1C-202ENST00000361007 4734 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
AP1S3Q96PC3 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC11.23□□□□□ -0.61
AP1S3Q96PC3 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
AP1S3Q96PC3 YPEL2-201ENST00000312655 5217 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
AP1S3Q96PC3 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC11.23□□□□□ -0.61
AP1S3Q96PC3 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC11.23□□□□□ -0.61
AP1S3Q96PC3 IDS-201ENST00000340855 7619 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
AP1S3Q96PC3 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
AP1S3Q96PC3 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
AP1S3Q96PC3 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
AP1S3Q96PC3 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
AP1S3Q96PC3 MRPL3P1-201ENST00000400109 1033 ntBASIC11.23□□□□□ -0.61
AP1S3Q96PC3 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC11.23□□□□□ -0.61
AP1S3Q96PC3 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
AP1S3Q96PC3 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC11.23□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms