Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.37□□□□□ -0.11
PDLIM5Q96HC4 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDLIM5Q96HC4 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
PDLIM5Q96HC4 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PDLIM5Q96HC4 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.37□□□□□ -0.11
PDLIM5Q96HC4 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC14.37□□□□□ -0.11
PDLIM5Q96HC4 SHC1P1-201ENST00000425230 1745 ntBASIC14.37□□□□□ -0.11
PDLIM5Q96HC4 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
PDLIM5Q96HC4 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDLIM5Q96HC4 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PDLIM5Q96HC4 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDLIM5Q96HC4 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDLIM5Q96HC4 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.37□□□□□ -0.11
PDLIM5Q96HC4 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PDLIM5Q96HC4 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDLIM5Q96HC4 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PDLIM5Q96HC4 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PDLIM5Q96HC4 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDLIM5Q96HC4 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDLIM5Q96HC4 AL161772.1-201ENST00000610494 4412 ntBASIC14.36□□□□□ -0.11
PDLIM5Q96HC4 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDLIM5Q96HC4 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDLIM5Q96HC4 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.36□□□□□ -0.11
PDLIM5Q96HC4 PKD1P5-201ENST00000532415 10291 ntBASIC14.36□□□□□ -0.11
PDLIM5Q96HC4 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
PDLIM5Q96HC4 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
PDLIM5Q96HC4 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDLIM5Q96HC4 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDLIM5Q96HC4 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
PDLIM5Q96HC4 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PDLIM5Q96HC4 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
PDLIM5Q96HC4 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PDLIM5Q96HC4 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDLIM5Q96HC4 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PDLIM5Q96HC4 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.36□□□□□ -0.11
PDLIM5Q96HC4 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PDLIM5Q96HC4 CNN2P10-201ENST00000443067 918 ntBASIC14.36□□□□□ -0.11
PDLIM5Q96HC4 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.36□□□□□ -0.11
PDLIM5Q96HC4 PPY2P-201ENST00000582808 702 ntBASIC14.36□□□□□ -0.11
PDLIM5Q96HC4 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PDLIM5Q96HC4 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.36□□□□□ -0.11
PDLIM5Q96HC4 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC14.36□□□□□ -0.11
PDLIM5Q96HC4 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.36□□□□□ -0.11
PDLIM5Q96HC4 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDLIM5Q96HC4 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PDLIM5Q96HC4 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDLIM5Q96HC4 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDLIM5Q96HC4 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDLIM5Q96HC4 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PDLIM5Q96HC4 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
PDLIM5Q96HC4 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDLIM5Q96HC4 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDLIM5Q96HC4 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.36□□□□□ -0.11
PDLIM5Q96HC4 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDLIM5Q96HC4 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PDLIM5Q96HC4 KRT8P4-201ENST00000509735 1454 ntBASIC14.36□□□□□ -0.11
PDLIM5Q96HC4 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDLIM5Q96HC4 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
PDLIM5Q96HC4 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.36□□□□□ -0.11
PDLIM5Q96HC4 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDLIM5Q96HC4 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC14.36□□□□□ -0.11
PDLIM5Q96HC4 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
PDLIM5Q96HC4 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
PDLIM5Q96HC4 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PDLIM5Q96HC4 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDLIM5Q96HC4 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PDLIM5Q96HC4 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
PDLIM5Q96HC4 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
PDLIM5Q96HC4 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
PDLIM5Q96HC4 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDLIM5Q96HC4 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDLIM5Q96HC4 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDLIM5Q96HC4 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDLIM5Q96HC4 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.35□□□□□ -0.11
PDLIM5Q96HC4 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.35□□□□□ -0.11
PDLIM5Q96HC4 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDLIM5Q96HC4 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PDLIM5Q96HC4 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PDLIM5Q96HC4 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PDLIM5Q96HC4 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.35□□□□□ -0.11
PDLIM5Q96HC4 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.35□□□□□ -0.11
PDLIM5Q96HC4 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.35□□□□□ -0.11
PDLIM5Q96HC4 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PDLIM5Q96HC4 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.35□□□□□ -0.11
PDLIM5Q96HC4 TMEM198B-204ENST00000484016 896 ntBASIC14.35□□□□□ -0.11
PDLIM5Q96HC4 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDLIM5Q96HC4 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PDLIM5Q96HC4 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14.35□□□□□ -0.11
PDLIM5Q96HC4 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC14.35□□□□□ -0.11
PDLIM5Q96HC4 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PDLIM5Q96HC4 ORC6-206ENST00000568364 888 ntTSL 5 BASIC14.35□□□□□ -0.11
PDLIM5Q96HC4 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
PDLIM5Q96HC4 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.35□□□□□ -0.11
PDLIM5Q96HC4 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.35□□□□□ -0.11
PDLIM5Q96HC4 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDLIM5Q96HC4 AL136301.1-201ENST00000615830 422 ntBASIC14.35□□□□□ -0.11
PDLIM5Q96HC4 AL162274.1-201ENST00000617191 1098 ntBASIC14.35□□□□□ -0.11
PDLIM5Q96HC4 AC008687.7-202ENST00000637404 953 ntBASIC14.35□□□□□ -0.11
PDLIM5Q96HC4 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDLIM5Q96HC4 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms