Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
DDX11Q96FC9 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
DDX11Q96FC9 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
DDX11Q96FC9 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
DDX11Q96FC9 RPS15-201ENST00000233609 534 ntTSL 2 BASIC17.57■□□□□ 0.4
DDX11Q96FC9 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DDX11Q96FC9 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DDX11Q96FC9 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DDX11Q96FC9 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
DDX11Q96FC9 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
DDX11Q96FC9 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
DDX11Q96FC9 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
DDX11Q96FC9 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC17.57■□□□□ 0.4
DDX11Q96FC9 EIF3FP3-201ENST00000434851 1086 ntBASIC17.57■□□□□ 0.4
DDX11Q96FC9 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC17.57■□□□□ 0.4
DDX11Q96FC9 AP001258.2-201ENST00000529891 490 ntBASIC17.57■□□□□ 0.4
DDX11Q96FC9 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC17.57■□□□□ 0.4
DDX11Q96FC9 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC17.57■□□□□ 0.4
DDX11Q96FC9 DUX4L47-201ENST00000566374 394 ntBASIC17.57■□□□□ 0.4
DDX11Q96FC9 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC17.57■□□□□ 0.4
DDX11Q96FC9 RPS15-205ENST00000586686 562 ntTSL 5 BASIC17.57■□□□□ 0.4
DDX11Q96FC9 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC17.57■□□□□ 0.4
DDX11Q96FC9 RPS15-208ENST00000591804 711 ntTSL 5 BASIC17.57■□□□□ 0.4
DDX11Q96FC9 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
DDX11Q96FC9 KLK3-211ENST00000597483 810 ntTSL 2 BASIC17.57■□□□□ 0.4
DDX11Q96FC9 ECM1P1-201ENST00000604092 1279 ntBASIC17.57■□□□□ 0.4
DDX11Q96FC9 PRKN-211ENST00000615065 261 ntTSL 5 BASIC17.57■□□□□ 0.4
DDX11Q96FC9 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
DDX11Q96FC9 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC17.57■□□□□ 0.4
DDX11Q96FC9 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
DDX11Q96FC9 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DDX11Q96FC9 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
DDX11Q96FC9 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DDX11Q96FC9 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DDX11Q96FC9 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DDX11Q96FC9 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DDX11Q96FC9 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DDX11Q96FC9 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
DDX11Q96FC9 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
DDX11Q96FC9 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC17.57■□□□□ 0.4
DDX11Q96FC9 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC17.57■□□□□ 0.4
DDX11Q96FC9 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DDX11Q96FC9 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
DDX11Q96FC9 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
DDX11Q96FC9 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC17.57■□□□□ 0.4
DDX11Q96FC9 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC17.57■□□□□ 0.4
DDX11Q96FC9 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
DDX11Q96FC9 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
DDX11Q96FC9 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC17.56■□□□□ 0.4
DDX11Q96FC9 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DDX11Q96FC9 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DDX11Q96FC9 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC17.56■□□□□ 0.4
DDX11Q96FC9 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
DDX11Q96FC9 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
DDX11Q96FC9 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
DDX11Q96FC9 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DDX11Q96FC9 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
DDX11Q96FC9 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC17.56■□□□□ 0.4
DDX11Q96FC9 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
DDX11Q96FC9 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
DDX11Q96FC9 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DDX11Q96FC9 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DDX11Q96FC9 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
DDX11Q96FC9 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
DDX11Q96FC9 AGER-203ENST00000375065 665 ntTSL 2 BASIC17.56■□□□□ 0.4
DDX11Q96FC9 LSM5-207ENST00000410044 687 ntTSL 3 BASIC17.56■□□□□ 0.4
DDX11Q96FC9 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
DDX11Q96FC9 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC17.56■□□□□ 0.4
DDX11Q96FC9 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC17.56■□□□□ 0.4
DDX11Q96FC9 ZNF767P-206ENST00000513792 565 ntBASIC17.56■□□□□ 0.4
DDX11Q96FC9 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
DDX11Q96FC9 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
DDX11Q96FC9 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC17.56■□□□□ 0.4
DDX11Q96FC9 RN7SL48P-201ENST00000579283 293 ntBASIC17.56■□□□□ 0.4
DDX11Q96FC9 AC084346.2-201ENST00000607097 949 ntBASIC17.56■□□□□ 0.4
DDX11Q96FC9 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC17.56■□□□□ 0.4
DDX11Q96FC9 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC17.56■□□□□ 0.4
DDX11Q96FC9 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DDX11Q96FC9 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DDX11Q96FC9 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DDX11Q96FC9 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC17.56■□□□□ 0.4
DDX11Q96FC9 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC17.56■□□□□ 0.4
DDX11Q96FC9 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
DDX11Q96FC9 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
DDX11Q96FC9 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC17.55■□□□□ 0.4
DDX11Q96FC9 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC17.55■□□□□ 0.4
DDX11Q96FC9 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
DDX11Q96FC9 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
DDX11Q96FC9 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
DDX11Q96FC9 ST20-AS1-201ENST00000560255 4223 ntBASIC17.55■□□□□ 0.4
DDX11Q96FC9 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DDX11Q96FC9 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
DDX11Q96FC9 RPS3-201ENST00000278572 907 ntTSL 3 BASIC17.55■□□□□ 0.4
DDX11Q96FC9 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC17.55■□□□□ 0.4
DDX11Q96FC9 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
DDX11Q96FC9 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC17.55■□□□□ 0.4
DDX11Q96FC9 AC022616.1-201ENST00000518688 554 ntBASIC17.55■□□□□ 0.4
DDX11Q96FC9 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC17.55■□□□□ 0.4
DDX11Q96FC9 ACR-203ENST00000529621 708 ntTSL 5 BASIC17.55■□□□□ 0.4
DDX11Q96FC9 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms