Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC12.58□□□□□ -0.4
USP9XQ93008 AC006547.1-209ENST00000596334 996 ntTSL 5 BASIC12.58□□□□□ -0.4
USP9XQ93008 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC12.58□□□□□ -0.4
USP9XQ93008 PAX6-238ENST00000638755 1161 ntTSL 5 BASIC12.58□□□□□ -0.4
USP9XQ93008 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
USP9XQ93008 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC12.58□□□□□ -0.4
USP9XQ93008 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC12.58□□□□□ -0.4
USP9XQ93008 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
USP9XQ93008 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
USP9XQ93008 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
USP9XQ93008 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
USP9XQ93008 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
USP9XQ93008 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
USP9XQ93008 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
USP9XQ93008 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC12.57□□□□□ -0.4
USP9XQ93008 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
USP9XQ93008 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
USP9XQ93008 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC12.57□□□□□ -0.4
USP9XQ93008 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC12.57□□□□□ -0.4
USP9XQ93008 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
USP9XQ93008 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC12.57□□□□□ -0.4
USP9XQ93008 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
USP9XQ93008 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
USP9XQ93008 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
USP9XQ93008 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
USP9XQ93008 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC12.57□□□□□ -0.4
USP9XQ93008 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC12.57□□□□□ -0.4
USP9XQ93008 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC12.57□□□□□ -0.4
USP9XQ93008 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
USP9XQ93008 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
USP9XQ93008 FAM25A-201ENST00000343959 345 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
USP9XQ93008 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
USP9XQ93008 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC12.57□□□□□ -0.4
USP9XQ93008 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC12.57□□□□□ -0.4
USP9XQ93008 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC12.57□□□□□ -0.4
USP9XQ93008 C1orf198-207ENST00000523410 1041 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
USP9XQ93008 DLK1-205ENST00000556051 469 ntTSL 2 BASIC12.57□□□□□ -0.4
USP9XQ93008 AC005274.1-201ENST00000623460 802 ntBASIC12.57□□□□□ -0.4
USP9XQ93008 AL353658.2-201ENST00000629794 519 ntTSL 5 BASIC12.57□□□□□ -0.4
USP9XQ93008 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
USP9XQ93008 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC12.57□□□□□ -0.4
USP9XQ93008 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC12.57□□□□□ -0.4
USP9XQ93008 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC12.57□□□□□ -0.4
USP9XQ93008 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
USP9XQ93008 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
USP9XQ93008 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
USP9XQ93008 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
USP9XQ93008 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
USP9XQ93008 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
USP9XQ93008 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
USP9XQ93008 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
USP9XQ93008 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
USP9XQ93008 KRT8P6-201ENST00000399259 1207 ntBASIC12.57□□□□□ -0.4
USP9XQ93008 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC12.57□□□□□ -0.4
USP9XQ93008 ST13P19-201ENST00000442505 1124 ntBASIC12.57□□□□□ -0.4
USP9XQ93008 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC12.57□□□□□ -0.4
USP9XQ93008 SEPHS2P1-201ENST00000511618 1162 ntBASIC12.57□□□□□ -0.4
USP9XQ93008 AL132994.1-201ENST00000554098 400 ntBASIC12.57□□□□□ -0.4
USP9XQ93008 KRT8P2-201ENST00000556193 944 ntBASIC12.57□□□□□ -0.4
USP9XQ93008 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC12.57□□□□□ -0.4
USP9XQ93008 NT5C-204ENST00000578337 582 ntTSL 2 BASIC12.57□□□□□ -0.4
USP9XQ93008 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC12.57□□□□□ -0.4
USP9XQ93008 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
USP9XQ93008 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
USP9XQ93008 AC139712.1-201ENST00000378256 1875 ntBASIC12.57□□□□□ -0.4
USP9XQ93008 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
USP9XQ93008 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
USP9XQ93008 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
USP9XQ93008 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC12.56□□□□□ -0.4
USP9XQ93008 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
USP9XQ93008 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC12.56□□□□□ -0.4
USP9XQ93008 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
USP9XQ93008 CICP23-201ENST00000605013 2741 ntBASIC12.56□□□□□ -0.4
USP9XQ93008 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC12.56□□□□□ -0.4
USP9XQ93008 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
USP9XQ93008 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
USP9XQ93008 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
USP9XQ93008 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC12.56□□□□□ -0.4
USP9XQ93008 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
USP9XQ93008 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
USP9XQ93008 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC12.56□□□□□ -0.4
USP9XQ93008 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC12.56□□□□□ -0.4
USP9XQ93008 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC12.56□□□□□ -0.4
USP9XQ93008 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC12.56□□□□□ -0.4
USP9XQ93008 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
USP9XQ93008 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC12.56□□□□□ -0.4
USP9XQ93008 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
USP9XQ93008 GGNBP1-204ENST00000613113 887 ntBASIC12.56□□□□□ -0.4
USP9XQ93008 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
USP9XQ93008 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
USP9XQ93008 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
USP9XQ93008 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
USP9XQ93008 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
USP9XQ93008 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC12.56□□□□□ -0.4
USP9XQ93008 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
USP9XQ93008 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
USP9XQ93008 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
USP9XQ93008 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC12.56□□□□□ -0.4
USP9XQ93008 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
USP9XQ93008 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms