Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
STAG1Q8WVM7 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
STAG1Q8WVM7 NPPA-201ENST00000376476 728 ntTSL 3 BASIC17.28■□□□□ 0.36
STAG1Q8WVM7 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
STAG1Q8WVM7 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC17.28■□□□□ 0.36
STAG1Q8WVM7 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
STAG1Q8WVM7 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC17.28■□□□□ 0.36
STAG1Q8WVM7 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC17.28■□□□□ 0.36
STAG1Q8WVM7 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC17.28■□□□□ 0.36
STAG1Q8WVM7 EID1-202ENST00000560490 584 ntTSL 3 BASIC17.28■□□□□ 0.36
STAG1Q8WVM7 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC17.28■□□□□ 0.36
STAG1Q8WVM7 RN7SL163P-201ENST00000583100 276 ntBASIC17.28■□□□□ 0.36
STAG1Q8WVM7 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
STAG1Q8WVM7 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
STAG1Q8WVM7 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC17.28■□□□□ 0.36
STAG1Q8WVM7 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
STAG1Q8WVM7 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
STAG1Q8WVM7 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC17.28■□□□□ 0.36
STAG1Q8WVM7 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
STAG1Q8WVM7 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
STAG1Q8WVM7 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC17.28■□□□□ 0.36
STAG1Q8WVM7 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
STAG1Q8WVM7 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
STAG1Q8WVM7 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
STAG1Q8WVM7 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC17.27■□□□□ 0.36
STAG1Q8WVM7 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
STAG1Q8WVM7 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC17.27■□□□□ 0.36
STAG1Q8WVM7 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
STAG1Q8WVM7 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
STAG1Q8WVM7 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
STAG1Q8WVM7 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
STAG1Q8WVM7 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
STAG1Q8WVM7 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC17.27■□□□□ 0.36
STAG1Q8WVM7 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC17.27■□□□□ 0.36
STAG1Q8WVM7 AC104073.2-201ENST00000453737 312 ntBASIC17.27■□□□□ 0.36
STAG1Q8WVM7 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC17.27■□□□□ 0.36
STAG1Q8WVM7 TPI1-206ENST00000488464 791 ntTSL 5 BASIC17.27■□□□□ 0.36
STAG1Q8WVM7 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
STAG1Q8WVM7 AC008805.1-201ENST00000590892 364 ntBASIC17.27■□□□□ 0.36
STAG1Q8WVM7 AL606495.2-201ENST00000605867 535 ntBASIC17.27■□□□□ 0.36
STAG1Q8WVM7 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
STAG1Q8WVM7 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
STAG1Q8WVM7 GSN-209ENST00000449733 2702 ntTSL 2 BASIC17.27■□□□□ 0.36
STAG1Q8WVM7 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
STAG1Q8WVM7 RN7SL832P-201ENST00000607781 1756 ntBASIC17.27■□□□□ 0.35
STAG1Q8WVM7 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
STAG1Q8WVM7 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC17.27■□□□□ 0.35
STAG1Q8WVM7 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
STAG1Q8WVM7 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC17.27■□□□□ 0.35
STAG1Q8WVM7 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC17.27■□□□□ 0.35
STAG1Q8WVM7 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
STAG1Q8WVM7 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
STAG1Q8WVM7 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
STAG1Q8WVM7 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
STAG1Q8WVM7 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC17.27■□□□□ 0.35
STAG1Q8WVM7 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
STAG1Q8WVM7 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
STAG1Q8WVM7 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
STAG1Q8WVM7 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC17.26■□□□□ 0.35
STAG1Q8WVM7 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
STAG1Q8WVM7 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
STAG1Q8WVM7 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
STAG1Q8WVM7 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
STAG1Q8WVM7 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
STAG1Q8WVM7 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
STAG1Q8WVM7 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
STAG1Q8WVM7 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
STAG1Q8WVM7 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
STAG1Q8WVM7 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
STAG1Q8WVM7 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
STAG1Q8WVM7 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC17.26■□□□□ 0.35
STAG1Q8WVM7 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC17.26■□□□□ 0.35
STAG1Q8WVM7 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
STAG1Q8WVM7 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
STAG1Q8WVM7 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
STAG1Q8WVM7 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC17.26■□□□□ 0.35
STAG1Q8WVM7 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
STAG1Q8WVM7 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC17.26■□□□□ 0.35
STAG1Q8WVM7 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
STAG1Q8WVM7 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC17.26■□□□□ 0.35
STAG1Q8WVM7 AC016700.1-201ENST00000429424 312 ntBASIC17.26■□□□□ 0.35
STAG1Q8WVM7 HIST2H2BC-201ENST00000498492 580 ntBASIC17.26■□□□□ 0.35
STAG1Q8WVM7 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC17.26■□□□□ 0.35
STAG1Q8WVM7 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC17.26■□□□□ 0.35
STAG1Q8WVM7 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC17.26■□□□□ 0.35
STAG1Q8WVM7 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC17.26■□□□□ 0.35
STAG1Q8WVM7 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC17.26■□□□□ 0.35
STAG1Q8WVM7 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC17.26■□□□□ 0.35
STAG1Q8WVM7 ACTG1P17-201ENST00000558391 1119 ntBASIC17.26■□□□□ 0.35
STAG1Q8WVM7 CSH2-206ENST00000560142 749 ntTSL 5 BASIC17.26■□□□□ 0.35
STAG1Q8WVM7 AC013355.1-201ENST00000562625 723 ntBASIC17.26■□□□□ 0.35
STAG1Q8WVM7 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
STAG1Q8WVM7 SNORD3B-2-202ENST00000571722 791 ntBASIC17.26■□□□□ 0.35
STAG1Q8WVM7 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC17.26■□□□□ 0.35
STAG1Q8WVM7 AC090164.2-201ENST00000611487 516 ntBASIC17.26■□□□□ 0.35
STAG1Q8WVM7 AC133540.1-201ENST00000620845 1019 ntBASIC17.26■□□□□ 0.35
STAG1Q8WVM7 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
STAG1Q8WVM7 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
STAG1Q8WVM7 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC17.26■□□□□ 0.35
STAG1Q8WVM7 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms