Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.23□□□□□ -0.13
CLHC1Q8NHS4 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLHC1Q8NHS4 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
CLHC1Q8NHS4 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.23□□□□□ -0.13
CLHC1Q8NHS4 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CLHC1Q8NHS4 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLHC1Q8NHS4 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLHC1Q8NHS4 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CLHC1Q8NHS4 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLHC1Q8NHS4 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLHC1Q8NHS4 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLHC1Q8NHS4 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.23□□□□□ -0.13
CLHC1Q8NHS4 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CLHC1Q8NHS4 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.22□□□□□ -0.13
CLHC1Q8NHS4 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLHC1Q8NHS4 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLHC1Q8NHS4 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.22□□□□□ -0.13
CLHC1Q8NHS4 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.22□□□□□ -0.13
CLHC1Q8NHS4 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLHC1Q8NHS4 KRT8P35-201ENST00000483942 1338 ntBASIC14.22□□□□□ -0.13
CLHC1Q8NHS4 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLHC1Q8NHS4 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLHC1Q8NHS4 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLHC1Q8NHS4 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLHC1Q8NHS4 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLHC1Q8NHS4 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLHC1Q8NHS4 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLHC1Q8NHS4 RET-205ENST00000615310 4337 ntTSL 5 BASIC14.22□□□□□ -0.13
CLHC1Q8NHS4 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLHC1Q8NHS4 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.22□□□□□ -0.13
CLHC1Q8NHS4 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLHC1Q8NHS4 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLHC1Q8NHS4 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLHC1Q8NHS4 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLHC1Q8NHS4 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLHC1Q8NHS4 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLHC1Q8NHS4 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
CLHC1Q8NHS4 ACTBP8-201ENST00000403258 1108 ntBASIC14.22□□□□□ -0.13
CLHC1Q8NHS4 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
CLHC1Q8NHS4 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLHC1Q8NHS4 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLHC1Q8NHS4 API5-211ENST00000534695 560 ntTSL 5 BASIC14.22□□□□□ -0.13
CLHC1Q8NHS4 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.22□□□□□ -0.13
CLHC1Q8NHS4 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.22□□□□□ -0.13
CLHC1Q8NHS4 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLHC1Q8NHS4 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.22□□□□□ -0.13
CLHC1Q8NHS4 CU634019.7-201ENST00000624153 1185 ntBASIC14.22□□□□□ -0.13
CLHC1Q8NHS4 FP236241.2-201ENST00000624906 1185 ntBASIC14.22□□□□□ -0.13
CLHC1Q8NHS4 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLHC1Q8NHS4 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLHC1Q8NHS4 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLHC1Q8NHS4 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.22□□□□□ -0.13
CLHC1Q8NHS4 AC011474.4-201ENST00000623523 2076 ntBASIC14.22□□□□□ -0.13
CLHC1Q8NHS4 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
CLHC1Q8NHS4 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLHC1Q8NHS4 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLHC1Q8NHS4 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLHC1Q8NHS4 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.22□□□□□ -0.13
CLHC1Q8NHS4 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLHC1Q8NHS4 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
CLHC1Q8NHS4 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.22□□□□□ -0.13
CLHC1Q8NHS4 AC016397.2-201ENST00000624848 1985 ntBASIC14.22□□□□□ -0.13
CLHC1Q8NHS4 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLHC1Q8NHS4 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLHC1Q8NHS4 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLHC1Q8NHS4 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLHC1Q8NHS4 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.21□□□□□ -0.13
CLHC1Q8NHS4 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLHC1Q8NHS4 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.21□□□□□ -0.13
CLHC1Q8NHS4 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLHC1Q8NHS4 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLHC1Q8NHS4 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLHC1Q8NHS4 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLHC1Q8NHS4 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CLHC1Q8NHS4 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLHC1Q8NHS4 MSTO2P-201ENST00000314835 1709 ntBASIC14.21□□□□□ -0.13
CLHC1Q8NHS4 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.21□□□□□ -0.13
CLHC1Q8NHS4 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLHC1Q8NHS4 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLHC1Q8NHS4 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLHC1Q8NHS4 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLHC1Q8NHS4 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.21□□□□□ -0.13
CLHC1Q8NHS4 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLHC1Q8NHS4 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLHC1Q8NHS4 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
CLHC1Q8NHS4 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLHC1Q8NHS4 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLHC1Q8NHS4 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.21□□□□□ -0.13
CLHC1Q8NHS4 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLHC1Q8NHS4 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLHC1Q8NHS4 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLHC1Q8NHS4 AC087499.6-201ENST00000411576 835 ntBASIC14.21□□□□□ -0.13
CLHC1Q8NHS4 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLHC1Q8NHS4 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.21□□□□□ -0.13
CLHC1Q8NHS4 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.21□□□□□ -0.13
CLHC1Q8NHS4 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.21□□□□□ -0.13
CLHC1Q8NHS4 KRT18P25-201ENST00000508931 1278 ntBASIC14.21□□□□□ -0.13
CLHC1Q8NHS4 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLHC1Q8NHS4 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.21□□□□□ -0.13
CLHC1Q8NHS4 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms