Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.84□□□□□ -0.19
SLC38A9Q8NBW4 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC38A9Q8NBW4 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SLC38A9Q8NBW4 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.84□□□□□ -0.19
SLC38A9Q8NBW4 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
SLC38A9Q8NBW4 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.84□□□□□ -0.19
SLC38A9Q8NBW4 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC38A9Q8NBW4 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC38A9Q8NBW4 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC38A9Q8NBW4 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
SLC38A9Q8NBW4 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC38A9Q8NBW4 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.84□□□□□ -0.19
SLC38A9Q8NBW4 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC38A9Q8NBW4 AC239868.1-201ENST00000369385 493 ntBASIC13.84□□□□□ -0.19
SLC38A9Q8NBW4 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC13.84□□□□□ -0.19
SLC38A9Q8NBW4 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC38A9Q8NBW4 GGCT-203ENST00000409144 836 ntTSL 2 BASIC13.84□□□□□ -0.19
SLC38A9Q8NBW4 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SLC38A9Q8NBW4 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC13.84□□□□□ -0.19
SLC38A9Q8NBW4 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC13.84□□□□□ -0.19
SLC38A9Q8NBW4 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC38A9Q8NBW4 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC13.84□□□□□ -0.19
SLC38A9Q8NBW4 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC13.84□□□□□ -0.19
SLC38A9Q8NBW4 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SLC38A9Q8NBW4 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SLC38A9Q8NBW4 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
SLC38A9Q8NBW4 COG4-212ENST00000564653 590 ntTSL 5 BASIC13.84□□□□□ -0.19
SLC38A9Q8NBW4 NAT9-211ENST00000580632 799 ntTSL 3 BASIC13.84□□□□□ -0.19
SLC38A9Q8NBW4 RN7SL190P-201ENST00000582519 257 ntBASIC13.84□□□□□ -0.19
SLC38A9Q8NBW4 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC13.84□□□□□ -0.19
SLC38A9Q8NBW4 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC13.84□□□□□ -0.19
SLC38A9Q8NBW4 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC13.84□□□□□ -0.19
SLC38A9Q8NBW4 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC13.84□□□□□ -0.19
SLC38A9Q8NBW4 AC012044.1-201ENST00000603431 297 ntBASIC13.84□□□□□ -0.19
SLC38A9Q8NBW4 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC13.84□□□□□ -0.19
SLC38A9Q8NBW4 AC092299.1-201ENST00000632679 757 ntBASIC13.84□□□□□ -0.19
SLC38A9Q8NBW4 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC38A9Q8NBW4 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC38A9Q8NBW4 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC38A9Q8NBW4 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SLC38A9Q8NBW4 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
SLC38A9Q8NBW4 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13.84□□□□□ -0.19
SLC38A9Q8NBW4 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.84□□□□□ -0.19
SLC38A9Q8NBW4 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC38A9Q8NBW4 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC38A9Q8NBW4 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC38A9Q8NBW4 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC38A9Q8NBW4 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
SLC38A9Q8NBW4 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.84□□□□□ -0.19
SLC38A9Q8NBW4 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC38A9Q8NBW4 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
SLC38A9Q8NBW4 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC13.83□□□□□ -0.19
SLC38A9Q8NBW4 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SLC38A9Q8NBW4 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
SLC38A9Q8NBW4 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
SLC38A9Q8NBW4 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
SLC38A9Q8NBW4 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
SLC38A9Q8NBW4 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.83□□□□□ -0.19
SLC38A9Q8NBW4 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.83□□□□□ -0.19
SLC38A9Q8NBW4 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
SLC38A9Q8NBW4 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
SLC38A9Q8NBW4 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
SLC38A9Q8NBW4 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
SLC38A9Q8NBW4 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SLC38A9Q8NBW4 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SLC38A9Q8NBW4 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.83□□□□□ -0.2
SLC38A9Q8NBW4 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SLC38A9Q8NBW4 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SLC38A9Q8NBW4 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.83□□□□□ -0.2
SLC38A9Q8NBW4 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SLC38A9Q8NBW4 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SLC38A9Q8NBW4 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SLC38A9Q8NBW4 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SLC38A9Q8NBW4 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC13.83□□□□□ -0.2
SLC38A9Q8NBW4 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SLC38A9Q8NBW4 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
SLC38A9Q8NBW4 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SLC38A9Q8NBW4 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SLC38A9Q8NBW4 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SLC38A9Q8NBW4 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SLC38A9Q8NBW4 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC13.83□□□□□ -0.2
SLC38A9Q8NBW4 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC13.83□□□□□ -0.2
SLC38A9Q8NBW4 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SLC38A9Q8NBW4 KRT18P36-201ENST00000411618 1276 ntBASIC13.83□□□□□ -0.2
SLC38A9Q8NBW4 HINT2P1-201ENST00000419438 481 ntBASIC13.83□□□□□ -0.2
SLC38A9Q8NBW4 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC13.83□□□□□ -0.2
SLC38A9Q8NBW4 XBP1P1-201ENST00000436573 652 ntBASIC13.83□□□□□ -0.2
SLC38A9Q8NBW4 AL353637.1-201ENST00000451571 732 ntBASIC13.83□□□□□ -0.2
SLC38A9Q8NBW4 CEP164P1-201ENST00000455142 418 ntBASIC13.83□□□□□ -0.2
SLC38A9Q8NBW4 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC13.83□□□□□ -0.2
SLC38A9Q8NBW4 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.83□□□□□ -0.2
SLC38A9Q8NBW4 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC13.83□□□□□ -0.2
SLC38A9Q8NBW4 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC13.83□□□□□ -0.2
SLC38A9Q8NBW4 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC13.83□□□□□ -0.2
SLC38A9Q8NBW4 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC13.83□□□□□ -0.2
SLC38A9Q8NBW4 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SLC38A9Q8NBW4 MIR4754-201ENST00000582477 89 ntBASIC13.83□□□□□ -0.2
SLC38A9Q8NBW4 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
SLC38A9Q8NBW4 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SLC38A9Q8NBW4 MEG3_2.1-201ENST00000611456 105 ntBASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms