Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC50Q8IVM0 SOCS2P1-201ENST00000417727 557 ntBASIC15.68■□□□□ 0.1
CCDC50Q8IVM0 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC50Q8IVM0 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CCDC50Q8IVM0 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC50Q8IVM0 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC50Q8IVM0 INGX-202ENST00000489074 768 ntBASIC15.68■□□□□ 0.1
CCDC50Q8IVM0 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.68■□□□□ 0.1
CCDC50Q8IVM0 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.68■□□□□ 0.1
CCDC50Q8IVM0 RFPL4AP1-201ENST00000530883 850 ntBASIC15.68■□□□□ 0.1
CCDC50Q8IVM0 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.68■□□□□ 0.1
CCDC50Q8IVM0 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC50Q8IVM0 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC50Q8IVM0 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC50Q8IVM0 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC50Q8IVM0 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC50Q8IVM0 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC50Q8IVM0 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC50Q8IVM0 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC50Q8IVM0 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC50Q8IVM0 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.68■□□□□ 0.1
CCDC50Q8IVM0 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
CCDC50Q8IVM0 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC50Q8IVM0 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC50Q8IVM0 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC50Q8IVM0 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.68■□□□□ 0.1
CCDC50Q8IVM0 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC50Q8IVM0 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC50Q8IVM0 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC50Q8IVM0 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CCDC50Q8IVM0 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
CCDC50Q8IVM0 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC50Q8IVM0 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC50Q8IVM0 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC50Q8IVM0 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC50Q8IVM0 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC50Q8IVM0 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.67■□□□□ 0.1
CCDC50Q8IVM0 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CCDC50Q8IVM0 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CCDC50Q8IVM0 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC50Q8IVM0 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC50Q8IVM0 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC50Q8IVM0 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC50Q8IVM0 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC50Q8IVM0 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC50Q8IVM0 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.67■□□□□ 0.1
CCDC50Q8IVM0 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CCDC50Q8IVM0 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC50Q8IVM0 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC50Q8IVM0 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CCDC50Q8IVM0 AC022616.1-201ENST00000518688 554 ntBASIC15.67■□□□□ 0.1
CCDC50Q8IVM0 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.67■□□□□ 0.1
CCDC50Q8IVM0 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC50Q8IVM0 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.67■□□□□ 0.1
CCDC50Q8IVM0 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.67■□□□□ 0.1
CCDC50Q8IVM0 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.67■□□□□ 0.1
CCDC50Q8IVM0 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.67■□□□□ 0.1
CCDC50Q8IVM0 AC093726.1-201ENST00000608064 963 ntBASIC15.67■□□□□ 0.1
CCDC50Q8IVM0 AC008761.3-201ENST00000624803 892 ntBASIC15.67■□□□□ 0.1
CCDC50Q8IVM0 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.67■□□□□ 0.1
CCDC50Q8IVM0 PRSS30P-206ENST00000641773 873 ntBASIC15.67■□□□□ 0.1
CCDC50Q8IVM0 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC50Q8IVM0 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC50Q8IVM0 LRRC59-203ENST00000576448 1531 ntBASIC15.67■□□□□ 0.1
CCDC50Q8IVM0 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CCDC50Q8IVM0 KRT8P22-201ENST00000562317 1415 ntBASIC15.67■□□□□ 0.1
CCDC50Q8IVM0 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CCDC50Q8IVM0 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC50Q8IVM0 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CCDC50Q8IVM0 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CCDC50Q8IVM0 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC50Q8IVM0 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CCDC50Q8IVM0 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC50Q8IVM0 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC50Q8IVM0 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC15.66■□□□□ 0.1
CCDC50Q8IVM0 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC50Q8IVM0 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC50Q8IVM0 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC50Q8IVM0 AGGF1P1-201ENST00000509500 2073 ntBASIC15.66■□□□□ 0.1
CCDC50Q8IVM0 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CCDC50Q8IVM0 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC50Q8IVM0 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC50Q8IVM0 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC50Q8IVM0 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC50Q8IVM0 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CCDC50Q8IVM0 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC50Q8IVM0 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC50Q8IVM0 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC50Q8IVM0 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC50Q8IVM0 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC50Q8IVM0 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC50Q8IVM0 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC50Q8IVM0 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC50Q8IVM0 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.66■□□□□ 0.1
CCDC50Q8IVM0 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC50Q8IVM0 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.66■□□□□ 0.1
CCDC50Q8IVM0 AL442647.2-201ENST00000429864 857 ntBASIC15.66■□□□□ 0.1
CCDC50Q8IVM0 AC092183.1-201ENST00000469884 875 ntBASIC15.66■□□□□ 0.1
CCDC50Q8IVM0 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CCDC50Q8IVM0 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms