Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.41■□□□□ 0.22
TRIM50Q86XT4 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM50Q86XT4 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
TRIM50Q86XT4 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.41■□□□□ 0.22
TRIM50Q86XT4 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
TRIM50Q86XT4 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC16.41■□□□□ 0.22
TRIM50Q86XT4 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC16.41■□□□□ 0.22
TRIM50Q86XT4 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.41■□□□□ 0.22
TRIM50Q86XT4 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TRIM50Q86XT4 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
TRIM50Q86XT4 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM50Q86XT4 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM50Q86XT4 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM50Q86XT4 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM50Q86XT4 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
TRIM50Q86XT4 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC16.4■□□□□ 0.22
TRIM50Q86XT4 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM50Q86XT4 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM50Q86XT4 KRT8P28-201ENST00000433288 1390 ntBASIC16.4■□□□□ 0.22
TRIM50Q86XT4 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM50Q86XT4 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
TRIM50Q86XT4 AJ011931.1-201ENST00000618749 2492 ntBASIC16.4■□□□□ 0.22
TRIM50Q86XT4 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM50Q86XT4 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM50Q86XT4 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM50Q86XT4 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM50Q86XT4 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM50Q86XT4 AC144831.1-201ENST00000573312 2656 ntBASIC16.4■□□□□ 0.22
TRIM50Q86XT4 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM50Q86XT4 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM50Q86XT4 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM50Q86XT4 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.4■□□□□ 0.22
TRIM50Q86XT4 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM50Q86XT4 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM50Q86XT4 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC16.4■□□□□ 0.22
TRIM50Q86XT4 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM50Q86XT4 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM50Q86XT4 ELK2AP-201ENST00000392510 1007 ntBASIC16.4■□□□□ 0.22
TRIM50Q86XT4 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC16.4■□□□□ 0.22
TRIM50Q86XT4 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC16.4■□□□□ 0.22
TRIM50Q86XT4 HNRNPA1P27-201ENST00000412087 955 ntBASIC16.4■□□□□ 0.22
TRIM50Q86XT4 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM50Q86XT4 RTN3P1-201ENST00000536295 711 ntBASIC16.4■□□□□ 0.22
TRIM50Q86XT4 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC16.4■□□□□ 0.22
TRIM50Q86XT4 AL353770.1-201ENST00000614915 403 ntBASIC16.4■□□□□ 0.22
TRIM50Q86XT4 MVK-217ENST00000639206 367 ntTSL 5 BASIC16.4■□□□□ 0.22
TRIM50Q86XT4 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.4■□□□□ 0.22
TRIM50Q86XT4 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.4■□□□□ 0.22
TRIM50Q86XT4 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM50Q86XT4 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC16.4■□□□□ 0.22
TRIM50Q86XT4 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.4■□□□□ 0.22
TRIM50Q86XT4 F10-203ENST00000409306 1450 ntTSL 3 BASIC16.4■□□□□ 0.22
TRIM50Q86XT4 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM50Q86XT4 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM50Q86XT4 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM50Q86XT4 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.4■□□□□ 0.22
TRIM50Q86XT4 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM50Q86XT4 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM50Q86XT4 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.4■□□□□ 0.22
TRIM50Q86XT4 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
TRIM50Q86XT4 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
TRIM50Q86XT4 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
TRIM50Q86XT4 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC16.39■□□□□ 0.21
TRIM50Q86XT4 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM50Q86XT4 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.39■□□□□ 0.21
TRIM50Q86XT4 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM50Q86XT4 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM50Q86XT4 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM50Q86XT4 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM50Q86XT4 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.39■□□□□ 0.21
TRIM50Q86XT4 AL590440.2-201ENST00000641973 1595 ntBASIC16.39■□□□□ 0.21
TRIM50Q86XT4 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM50Q86XT4 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM50Q86XT4 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC16.39■□□□□ 0.21
TRIM50Q86XT4 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM50Q86XT4 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.39■□□□□ 0.21
TRIM50Q86XT4 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TRIM50Q86XT4 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.39■□□□□ 0.21
TRIM50Q86XT4 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM50Q86XT4 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM50Q86XT4 MYO15B-237ENST00000642007 4893 ntBASIC16.39■□□□□ 0.21
TRIM50Q86XT4 AC018529.2-202ENST00000611482 3087 ntBASIC16.39■□□□□ 0.21
TRIM50Q86XT4 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
TRIM50Q86XT4 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
TRIM50Q86XT4 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TRIM50Q86XT4 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM50Q86XT4 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM50Q86XT4 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
TRIM50Q86XT4 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC16.39■□□□□ 0.21
TRIM50Q86XT4 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM50Q86XT4 PARVG-202ENST00000415224 999 ntTSL 2 BASIC16.39■□□□□ 0.21
TRIM50Q86XT4 HINT2P1-201ENST00000419438 481 ntBASIC16.39■□□□□ 0.21
TRIM50Q86XT4 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC16.39■□□□□ 0.21
TRIM50Q86XT4 PTPA-215ENST00000432124 567 ntTSL 4 BASIC16.39■□□□□ 0.21
TRIM50Q86XT4 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC16.39■□□□□ 0.21
TRIM50Q86XT4 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC16.39■□□□□ 0.21
TRIM50Q86XT4 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC16.39■□□□□ 0.21
TRIM50Q86XT4 RBM8B-201ENST00000555532 525 ntBASIC16.39■□□□□ 0.21
TRIM50Q86XT4 CENPX-208ENST00000584347 799 ntTSL 2 BASIC16.39■□□□□ 0.21
TRIM50Q86XT4 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms