Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.21□□□□□ -0.29
LRRC28Q86X40 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LRRC28Q86X40 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.21□□□□□ -0.29
LRRC28Q86X40 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
LRRC28Q86X40 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LRRC28Q86X40 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LRRC28Q86X40 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
LRRC28Q86X40 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
LRRC28Q86X40 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC13.21□□□□□ -0.3
LRRC28Q86X40 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
LRRC28Q86X40 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
LRRC28Q86X40 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LRRC28Q86X40 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
LRRC28Q86X40 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.21□□□□□ -0.3
LRRC28Q86X40 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
LRRC28Q86X40 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
LRRC28Q86X40 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRC28Q86X40 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LRRC28Q86X40 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.2□□□□□ -0.3
LRRC28Q86X40 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.2□□□□□ -0.3
LRRC28Q86X40 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.2□□□□□ -0.3
LRRC28Q86X40 NUTM2HP-201ENST00000442076 2498 ntBASIC13.2□□□□□ -0.3
LRRC28Q86X40 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
LRRC28Q86X40 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.2□□□□□ -0.3
LRRC28Q86X40 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LRRC28Q86X40 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.2□□□□□ -0.3
LRRC28Q86X40 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LRRC28Q86X40 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
LRRC28Q86X40 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
LRRC28Q86X40 EDF1-203ENST00000371649 790 ntTSL 2 BASIC13.2□□□□□ -0.3
LRRC28Q86X40 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
LRRC28Q86X40 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.2□□□□□ -0.3
LRRC28Q86X40 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.2□□□□□ -0.3
LRRC28Q86X40 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC13.2□□□□□ -0.3
LRRC28Q86X40 SLED1-202ENST00000512051 380 ntBASIC13.2□□□□□ -0.3
LRRC28Q86X40 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.2□□□□□ -0.3
LRRC28Q86X40 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC13.2□□□□□ -0.3
LRRC28Q86X40 AP005018.1-201ENST00000525475 301 ntBASIC13.2□□□□□ -0.3
LRRC28Q86X40 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.2□□□□□ -0.3
LRRC28Q86X40 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.2□□□□□ -0.3
LRRC28Q86X40 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.2□□□□□ -0.3
LRRC28Q86X40 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.2□□□□□ -0.3
LRRC28Q86X40 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.2□□□□□ -0.3
LRRC28Q86X40 AC015910.1-201ENST00000579400 975 ntBASIC13.2□□□□□ -0.3
LRRC28Q86X40 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.2□□□□□ -0.3
LRRC28Q86X40 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
LRRC28Q86X40 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.2□□□□□ -0.3
LRRC28Q86X40 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
LRRC28Q86X40 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.2□□□□□ -0.3
LRRC28Q86X40 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRC28Q86X40 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRC28Q86X40 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.2□□□□□ -0.3
LRRC28Q86X40 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRC28Q86X40 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRC28Q86X40 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRC28Q86X40 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.2□□□□□ -0.3
LRRC28Q86X40 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
LRRC28Q86X40 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRC28Q86X40 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRC28Q86X40 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRC28Q86X40 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRC28Q86X40 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC13.2□□□□□ -0.3
LRRC28Q86X40 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
LRRC28Q86X40 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
LRRC28Q86X40 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRC28Q86X40 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC13.2□□□□□ -0.3
LRRC28Q86X40 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRC28Q86X40 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRC28Q86X40 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRC28Q86X40 AC018665.1-201ENST00000622927 1362 ntBASIC13.2□□□□□ -0.3
LRRC28Q86X40 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRC28Q86X40 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRC28Q86X40 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRC28Q86X40 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRC28Q86X40 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRC28Q86X40 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.19□□□□□ -0.3
LRRC28Q86X40 AL031595.1-201ENST00000623969 4709 ntBASIC13.19□□□□□ -0.3
LRRC28Q86X40 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.19□□□□□ -0.3
LRRC28Q86X40 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRC28Q86X40 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRC28Q86X40 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
LRRC28Q86X40 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRC28Q86X40 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.19□□□□□ -0.3
LRRC28Q86X40 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.19□□□□□ -0.3
LRRC28Q86X40 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.19□□□□□ -0.3
LRRC28Q86X40 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRC28Q86X40 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.19□□□□□ -0.3
LRRC28Q86X40 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
LRRC28Q86X40 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.19□□□□□ -0.3
LRRC28Q86X40 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LRRC28Q86X40 PNKD-204ENST00000436005 978 ntTSL 5 BASIC13.19□□□□□ -0.3
LRRC28Q86X40 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRC28Q86X40 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.19□□□□□ -0.3
LRRC28Q86X40 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
LRRC28Q86X40 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.19□□□□□ -0.3
LRRC28Q86X40 AC005225.4-201ENST00000557330 545 ntBASIC13.19□□□□□ -0.3
LRRC28Q86X40 AL596325.1-201ENST00000563991 1082 ntBASIC13.19□□□□□ -0.3
LRRC28Q86X40 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC13.19□□□□□ -0.3
LRRC28Q86X40 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.19□□□□□ -0.3
LRRC28Q86X40 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms