Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC25Q86WR0 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC25Q86WR0 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC25Q86WR0 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CCDC25Q86WR0 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC25Q86WR0 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC25Q86WR0 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC25Q86WR0 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
CCDC25Q86WR0 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC25Q86WR0 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CCDC25Q86WR0 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.31■□□□□ 0.04
CCDC25Q86WR0 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.31■□□□□ 0.04
CCDC25Q86WR0 AP000347.1-202ENST00000435868 847 ntBASIC15.31■□□□□ 0.04
CCDC25Q86WR0 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.31■□□□□ 0.04
CCDC25Q86WR0 CNN2P2-201ENST00000443536 909 ntBASIC15.31■□□□□ 0.04
CCDC25Q86WR0 CNN2P3-201ENST00000450201 906 ntBASIC15.31■□□□□ 0.04
CCDC25Q86WR0 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.31■□□□□ 0.04
CCDC25Q86WR0 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.31■□□□□ 0.04
CCDC25Q86WR0 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.31■□□□□ 0.04
CCDC25Q86WR0 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.31■□□□□ 0.04
CCDC25Q86WR0 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.31■□□□□ 0.04
CCDC25Q86WR0 AL136317.3-201ENST00000618497 906 ntBASIC15.31■□□□□ 0.04
CCDC25Q86WR0 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC25Q86WR0 AC087499.5-201ENST00000452760 1342 ntBASIC15.31■□□□□ 0.04
CCDC25Q86WR0 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.31■□□□□ 0.04
CCDC25Q86WR0 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.31■□□□□ 0.04
CCDC25Q86WR0 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CCDC25Q86WR0 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC15.31■□□□□ 0.04
CCDC25Q86WR0 DRD5P1-201ENST00000456605 1438 ntBASIC15.31■□□□□ 0.04
CCDC25Q86WR0 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CCDC25Q86WR0 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CCDC25Q86WR0 AC020910.6-201ENST00000623084 1459 ntBASIC15.31■□□□□ 0.04
CCDC25Q86WR0 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC25Q86WR0 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.31■□□□□ 0.04
CCDC25Q86WR0 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC25Q86WR0 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC25Q86WR0 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC25Q86WR0 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC25Q86WR0 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC25Q86WR0 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC25Q86WR0 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC25Q86WR0 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.31■□□□□ 0.04
CCDC25Q86WR0 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC25Q86WR0 PCDHA5-203ENST00000614258 4248 ntBASIC15.31■□□□□ 0.04
CCDC25Q86WR0 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC25Q86WR0 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC15.31■□□□□ 0.04
CCDC25Q86WR0 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC25Q86WR0 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC25Q86WR0 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC25Q86WR0 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC25Q86WR0 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC15.3■□□□□ 0.04
CCDC25Q86WR0 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CCDC25Q86WR0 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC25Q86WR0 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC25Q86WR0 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC25Q86WR0 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CCDC25Q86WR0 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC25Q86WR0 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC25Q86WR0 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC25Q86WR0 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC15.3■□□□□ 0.04
CCDC25Q86WR0 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC25Q86WR0 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC25Q86WR0 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.3■□□□□ 0.04
CCDC25Q86WR0 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC15.3■□□□□ 0.04
CCDC25Q86WR0 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CCDC25Q86WR0 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.3■□□□□ 0.04
CCDC25Q86WR0 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC15.3■□□□□ 0.04
CCDC25Q86WR0 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC25Q86WR0 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC25Q86WR0 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC25Q86WR0 UPF3AP3-201ENST00000420996 769 ntBASIC15.3■□□□□ 0.04
CCDC25Q86WR0 BX842568.4-201ENST00000421222 227 ntBASIC15.3■□□□□ 0.04
CCDC25Q86WR0 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC25Q86WR0 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CCDC25Q86WR0 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.3■□□□□ 0.04
CCDC25Q86WR0 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CCDC25Q86WR0 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CCDC25Q86WR0 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.3■□□□□ 0.04
CCDC25Q86WR0 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.3■□□□□ 0.04
CCDC25Q86WR0 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC15.3■□□□□ 0.04
CCDC25Q86WR0 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC25Q86WR0 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC15.3■□□□□ 0.04
CCDC25Q86WR0 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC25Q86WR0 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC25Q86WR0 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC25Q86WR0 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.3■□□□□ 0.04
CCDC25Q86WR0 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.3■□□□□ 0.04
CCDC25Q86WR0 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.3■□□□□ 0.04
CCDC25Q86WR0 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.3■□□□□ 0.04
CCDC25Q86WR0 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC25Q86WR0 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.3■□□□□ 0.04
CCDC25Q86WR0 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.3■□□□□ 0.04
CCDC25Q86WR0 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.3■□□□□ 0.04
CCDC25Q86WR0 AL844908.2-201ENST00000609461 460 ntBASIC15.3■□□□□ 0.04
CCDC25Q86WR0 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC25Q86WR0 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC25Q86WR0 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CCDC25Q86WR0 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
CCDC25Q86WR0 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC25Q86WR0 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms