Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC18.25■□□□□ 0.51
UBE3BQ7Z3V4 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC18.25■□□□□ 0.51
UBE3BQ7Z3V4 PGAM1P5-201ENST00000548011 764 ntBASIC18.25■□□□□ 0.51
UBE3BQ7Z3V4 AC242376.1-201ENST00000559033 726 ntBASIC18.25■□□□□ 0.51
UBE3BQ7Z3V4 AC027237.1-201ENST00000560942 655 ntBASIC18.25■□□□□ 0.51
UBE3BQ7Z3V4 MIR4754-201ENST00000582477 89 ntBASIC18.25■□□□□ 0.51
UBE3BQ7Z3V4 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBE3BQ7Z3V4 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC18.25■□□□□ 0.51
UBE3BQ7Z3V4 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC18.25■□□□□ 0.51
UBE3BQ7Z3V4 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC18.25■□□□□ 0.51
UBE3BQ7Z3V4 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBE3BQ7Z3V4 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC18.25■□□□□ 0.51
UBE3BQ7Z3V4 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBE3BQ7Z3V4 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
UBE3BQ7Z3V4 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
UBE3BQ7Z3V4 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
UBE3BQ7Z3V4 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC18.25■□□□□ 0.51
UBE3BQ7Z3V4 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
UBE3BQ7Z3V4 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBE3BQ7Z3V4 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBE3BQ7Z3V4 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
UBE3BQ7Z3V4 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC18.25■□□□□ 0.51
UBE3BQ7Z3V4 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
UBE3BQ7Z3V4 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UBE3BQ7Z3V4 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
UBE3BQ7Z3V4 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC18.24■□□□□ 0.51
UBE3BQ7Z3V4 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UBE3BQ7Z3V4 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UBE3BQ7Z3V4 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UBE3BQ7Z3V4 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
UBE3BQ7Z3V4 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
UBE3BQ7Z3V4 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UBE3BQ7Z3V4 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC18.24■□□□□ 0.51
UBE3BQ7Z3V4 PARVG-202ENST00000415224 999 ntTSL 2 BASIC18.24■□□□□ 0.51
UBE3BQ7Z3V4 PTPA-217ENST00000434095 870 ntTSL 2 BASIC18.24■□□□□ 0.51
UBE3BQ7Z3V4 ST13P19-201ENST00000442505 1124 ntBASIC18.24■□□□□ 0.51
UBE3BQ7Z3V4 AL353637.1-201ENST00000451571 732 ntBASIC18.24■□□□□ 0.51
UBE3BQ7Z3V4 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC18.24■□□□□ 0.51
UBE3BQ7Z3V4 FOS-206ENST00000555347 1280 ntTSL 2 BASIC18.24■□□□□ 0.51
UBE3BQ7Z3V4 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC18.24■□□□□ 0.51
UBE3BQ7Z3V4 AC012044.1-201ENST00000603431 297 ntBASIC18.24■□□□□ 0.51
UBE3BQ7Z3V4 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC18.24■□□□□ 0.51
UBE3BQ7Z3V4 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC18.24■□□□□ 0.51
UBE3BQ7Z3V4 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC18.24■□□□□ 0.51
UBE3BQ7Z3V4 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UBE3BQ7Z3V4 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UBE3BQ7Z3V4 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC18.24■□□□□ 0.51
UBE3BQ7Z3V4 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
UBE3BQ7Z3V4 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UBE3BQ7Z3V4 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
UBE3BQ7Z3V4 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
UBE3BQ7Z3V4 AC015909.3-201ENST00000572855 1794 ntBASIC18.24■□□□□ 0.51
UBE3BQ7Z3V4 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC18.24■□□□□ 0.51
UBE3BQ7Z3V4 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UBE3BQ7Z3V4 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UBE3BQ7Z3V4 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC18.24■□□□□ 0.51
UBE3BQ7Z3V4 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
UBE3BQ7Z3V4 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
UBE3BQ7Z3V4 AHCYP4-201ENST00000419201 1315 ntBASIC18.23■□□□□ 0.51
UBE3BQ7Z3V4 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBE3BQ7Z3V4 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBE3BQ7Z3V4 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBE3BQ7Z3V4 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBE3BQ7Z3V4 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBE3BQ7Z3V4 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC18.23■□□□□ 0.51
UBE3BQ7Z3V4 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBE3BQ7Z3V4 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBE3BQ7Z3V4 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBE3BQ7Z3V4 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBE3BQ7Z3V4 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBE3BQ7Z3V4 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBE3BQ7Z3V4 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBE3BQ7Z3V4 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBE3BQ7Z3V4 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
UBE3BQ7Z3V4 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC18.23■□□□□ 0.51
UBE3BQ7Z3V4 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
UBE3BQ7Z3V4 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBE3BQ7Z3V4 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC18.23■□□□□ 0.51
UBE3BQ7Z3V4 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBE3BQ7Z3V4 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
UBE3BQ7Z3V4 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
UBE3BQ7Z3V4 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBE3BQ7Z3V4 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBE3BQ7Z3V4 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
UBE3BQ7Z3V4 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
UBE3BQ7Z3V4 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
UBE3BQ7Z3V4 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBE3BQ7Z3V4 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
UBE3BQ7Z3V4 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC18.23■□□□□ 0.51
UBE3BQ7Z3V4 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC18.23■□□□□ 0.51
UBE3BQ7Z3V4 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC18.23■□□□□ 0.51
UBE3BQ7Z3V4 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC18.23■□□□□ 0.51
UBE3BQ7Z3V4 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC18.23■□□□□ 0.51
UBE3BQ7Z3V4 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC18.23■□□□□ 0.51
UBE3BQ7Z3V4 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC18.23■□□□□ 0.51
UBE3BQ7Z3V4 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
UBE3BQ7Z3V4 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC18.23■□□□□ 0.51
UBE3BQ7Z3V4 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC18.23■□□□□ 0.51
UBE3BQ7Z3V4 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBE3BQ7Z3V4 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms