Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM53Q6P2H8 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM53Q6P2H8 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.66□□□□□ -0.22
TMEM53Q6P2H8 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC13.66□□□□□ -0.22
TMEM53Q6P2H8 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC13.66□□□□□ -0.22
TMEM53Q6P2H8 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.66□□□□□ -0.22
TMEM53Q6P2H8 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13.66□□□□□ -0.22
TMEM53Q6P2H8 SPCS2P1-201ENST00000561636 679 ntBASIC13.66□□□□□ -0.22
TMEM53Q6P2H8 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC13.66□□□□□ -0.22
TMEM53Q6P2H8 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
TMEM53Q6P2H8 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM53Q6P2H8 AC018442.1-201ENST00000421439 2061 ntBASIC13.66□□□□□ -0.22
TMEM53Q6P2H8 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM53Q6P2H8 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM53Q6P2H8 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM53Q6P2H8 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM53Q6P2H8 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM53Q6P2H8 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM53Q6P2H8 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.66□□□□□ -0.22
TMEM53Q6P2H8 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM53Q6P2H8 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
TMEM53Q6P2H8 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM53Q6P2H8 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM53Q6P2H8 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM53Q6P2H8 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.66□□□□□ -0.22
TMEM53Q6P2H8 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM53Q6P2H8 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM53Q6P2H8 AC090616.6-203ENST00000579186 1945 ntBASIC13.66□□□□□ -0.22
TMEM53Q6P2H8 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC13.66□□□□□ -0.22
TMEM53Q6P2H8 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
TMEM53Q6P2H8 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
TMEM53Q6P2H8 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM53Q6P2H8 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.66□□□□□ -0.22
TMEM53Q6P2H8 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
TMEM53Q6P2H8 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM53Q6P2H8 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM53Q6P2H8 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TMEM53Q6P2H8 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM53Q6P2H8 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM53Q6P2H8 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM53Q6P2H8 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM53Q6P2H8 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM53Q6P2H8 AL121723.1-201ENST00000445194 1519 ntBASIC13.65□□□□□ -0.22
TMEM53Q6P2H8 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM53Q6P2H8 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM53Q6P2H8 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM53Q6P2H8 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
TMEM53Q6P2H8 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.65□□□□□ -0.22
TMEM53Q6P2H8 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM53Q6P2H8 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM53Q6P2H8 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
TMEM53Q6P2H8 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM53Q6P2H8 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM53Q6P2H8 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM53Q6P2H8 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM53Q6P2H8 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
TMEM53Q6P2H8 SPDYE19P-201ENST00000338590 713 ntBASIC13.65□□□□□ -0.22
TMEM53Q6P2H8 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM53Q6P2H8 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
TMEM53Q6P2H8 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
TMEM53Q6P2H8 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM53Q6P2H8 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM53Q6P2H8 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM53Q6P2H8 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.65□□□□□ -0.22
TMEM53Q6P2H8 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM53Q6P2H8 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.65□□□□□ -0.22
TMEM53Q6P2H8 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.65□□□□□ -0.22
TMEM53Q6P2H8 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM53Q6P2H8 FAM207CP-201ENST00000443486 507 ntBASIC13.65□□□□□ -0.22
TMEM53Q6P2H8 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
TMEM53Q6P2H8 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM53Q6P2H8 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.65□□□□□ -0.22
TMEM53Q6P2H8 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.65□□□□□ -0.22
TMEM53Q6P2H8 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM53Q6P2H8 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.65□□□□□ -0.22
TMEM53Q6P2H8 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM53Q6P2H8 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM53Q6P2H8 AC036164.1-201ENST00000570544 333 ntBASIC13.65□□□□□ -0.22
TMEM53Q6P2H8 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM53Q6P2H8 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC13.65□□□□□ -0.22
TMEM53Q6P2H8 AC004233.3-201ENST00000607794 1269 ntBASIC13.65□□□□□ -0.22
TMEM53Q6P2H8 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM53Q6P2H8 OS9-218ENST00000551035 2246 ntTSL 2 BASIC13.65□□□□□ -0.22
TMEM53Q6P2H8 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TMEM53Q6P2H8 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM53Q6P2H8 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.65□□□□□ -0.22
TMEM53Q6P2H8 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM53Q6P2H8 AC020658.7-201ENST00000624274 2442 ntBASIC13.65□□□□□ -0.22
TMEM53Q6P2H8 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
TMEM53Q6P2H8 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.65□□□□□ -0.22
TMEM53Q6P2H8 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM53Q6P2H8 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.65□□□□□ -0.22
TMEM53Q6P2H8 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.65□□□□□ -0.22
TMEM53Q6P2H8 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM53Q6P2H8 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.65□□□□□ -0.22
TMEM53Q6P2H8 FAM214B-204ENST00000378566 2566 ntTSL 2 BASIC13.65□□□□□ -0.22
TMEM53Q6P2H8 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM53Q6P2H8 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM53Q6P2H8 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
TMEM53Q6P2H8 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms