Protein–RNA interactions for Protein: Q6AI14

SLC9A4, Sodium/hydrogen exchanger 4, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A4Q6AI14 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC9A4Q6AI14 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLC9A4Q6AI14 MIR1202-201ENST00000408529 83 ntBASIC15.14■□□□□ 0.01
SLC9A4Q6AI14 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.14■□□□□ 0.01
SLC9A4Q6AI14 KRT17P7-201ENST00000451704 1104 ntBASIC15.14■□□□□ 0.01
SLC9A4Q6AI14 COX20P2-201ENST00000452636 358 ntBASIC15.14■□□□□ 0.01
SLC9A4Q6AI14 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
SLC9A4Q6AI14 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.14■□□□□ 0.01
SLC9A4Q6AI14 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.14■□□□□ 0.01
SLC9A4Q6AI14 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.14■□□□□ 0.01
SLC9A4Q6AI14 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLC9A4Q6AI14 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.14■□□□□ 0.01
SLC9A4Q6AI14 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLC9A4Q6AI14 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.14■□□□□ 0.01
SLC9A4Q6AI14 AC027237.1-201ENST00000560942 655 ntBASIC15.14■□□□□ 0.01
SLC9A4Q6AI14 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.14■□□□□ 0.01
SLC9A4Q6AI14 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.14■□□□□ 0.01
SLC9A4Q6AI14 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.14■□□□□ 0.01
SLC9A4Q6AI14 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLC9A4Q6AI14 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.14■□□□□ 0.01
SLC9A4Q6AI14 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC15.14■□□□□ 0.01
SLC9A4Q6AI14 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC9A4Q6AI14 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC15.14■□□□□ 0.01
SLC9A4Q6AI14 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC9A4Q6AI14 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
SLC9A4Q6AI14 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.14■□□□□ 0.01
SLC9A4Q6AI14 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.14■□□□□ 0.01
SLC9A4Q6AI14 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.14■□□□□ 0.01
SLC9A4Q6AI14 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SLC9A4Q6AI14 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC9A4Q6AI14 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.14■□□□□ 0.01
SLC9A4Q6AI14 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
SLC9A4Q6AI14 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC9A4Q6AI14 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.14■□□□□ 0.01
SLC9A4Q6AI14 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLC9A4Q6AI14 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
SLC9A4Q6AI14 AHCYP2-201ENST00000430630 1300 ntBASIC15.14■□□□□ 0.01
SLC9A4Q6AI14 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC9A4Q6AI14 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC9A4Q6AI14 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC9A4Q6AI14 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC9A4Q6AI14 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC15.14■□□□□ 0.01
SLC9A4Q6AI14 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC9A4Q6AI14 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SLC9A4Q6AI14 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC9A4Q6AI14 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC15.13■□□□□ 0.01
SLC9A4Q6AI14 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC9A4Q6AI14 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.13■□□□□ 0.01
SLC9A4Q6AI14 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC9A4Q6AI14 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC9A4Q6AI14 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC9A4Q6AI14 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SLC9A4Q6AI14 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC9A4Q6AI14 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.13■□□□□ 0.01
SLC9A4Q6AI14 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SLC9A4Q6AI14 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SLC9A4Q6AI14 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.13■□□□□ 0.01
SLC9A4Q6AI14 MST1P2-201ENST00000457982 2291 ntBASIC15.13■□□□□ 0.01
SLC9A4Q6AI14 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
SLC9A4Q6AI14 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
SLC9A4Q6AI14 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC9A4Q6AI14 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
SLC9A4Q6AI14 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC9A4Q6AI14 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SLC9A4Q6AI14 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC9A4Q6AI14 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.13■□□□□ 0.01
SLC9A4Q6AI14 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
SLC9A4Q6AI14 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC15.13■□□□□ 0.01
SLC9A4Q6AI14 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC15.13■□□□□ 0.01
SLC9A4Q6AI14 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.13■□□□□ 0.01
SLC9A4Q6AI14 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC15.13■□□□□ 0.01
SLC9A4Q6AI14 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.13■□□□□ 0.01
SLC9A4Q6AI14 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.13■□□□□ 0.01
SLC9A4Q6AI14 RPL7P3-201ENST00000441388 714 ntBASIC15.13■□□□□ 0.01
SLC9A4Q6AI14 AL035414.1-201ENST00000451327 857 ntBASIC15.13■□□□□ 0.01
SLC9A4Q6AI14 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SLC9A4Q6AI14 CROCCP4-201ENST00000457096 498 ntBASIC15.13■□□□□ 0.01
SLC9A4Q6AI14 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.13■□□□□ 0.01
SLC9A4Q6AI14 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.13■□□□□ 0.01
SLC9A4Q6AI14 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SLC9A4Q6AI14 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
SLC9A4Q6AI14 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SLC9A4Q6AI14 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SLC9A4Q6AI14 AC106886.1-201ENST00000568660 600 ntBASIC15.13■□□□□ 0.01
SLC9A4Q6AI14 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.13■□□□□ 0.01
SLC9A4Q6AI14 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC15.13■□□□□ 0.01
SLC9A4Q6AI14 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC15.13■□□□□ 0.01
SLC9A4Q6AI14 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
SLC9A4Q6AI14 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC9A4Q6AI14 BEND3P1-201ENST00000421591 1944 ntBASIC15.13■□□□□ 0.01
SLC9A4Q6AI14 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC9A4Q6AI14 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC15.13■□□□□ 0.01
SLC9A4Q6AI14 KRT8P4-201ENST00000509735 1454 ntBASIC15.13■□□□□ 0.01
SLC9A4Q6AI14 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
SLC9A4Q6AI14 AC064801.2-201ENST00000625052 1303 ntBASIC15.13■□□□□ 0.01
SLC9A4Q6AI14 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.13■□□□□ 0.01
SLC9A4Q6AI14 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC9A4Q6AI14 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SLC9A4Q6AI14 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC9A4Q6AI14 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 489.7 ms