Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 MRPL37P1-201ENST00000592451 1337 ntBASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 AC020658.7-201ENST00000624274 2442 ntBASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 AC026434.2-201ENST00000506094 1078 ntBASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 AC027369.6-201ENST00000525520 931 ntBASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 AC092865.5-201ENST00000545435 363 ntBASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 MPI-209ENST00000564003 1195 ntTSL 2 BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 MIR3687-2-201ENST00000577708 61 ntBASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 SSH2-210ENST00000582084 560 ntTSL 3 BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 AC093813.1-201ENST00000605066 256 ntBASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 AL844908.2-201ENST00000609461 460 ntBASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 MIR3687-1-201ENST00000614492 61 ntBASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LINC00242Q5T6M2 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 AC003102.2-201ENST00000589195 1469 ntBASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 AGAP10P-201ENST00000454844 2418 ntBASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms