Protein–RNA interactions for Protein: Q53RE8

ANKRD39, Ankyrin repeat domain-containing protein 39, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD39Q53RE8 PCBP1-AS1-227ENST00000435880 2386 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
ANKRD39Q53RE8 LINC01634-201ENST00000443243 2379 ntTSL 2 BASIC10.67□□□□□ -0.7
ANKRD39Q53RE8 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
ANKRD39Q53RE8 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
ANKRD39Q53RE8 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC10.67□□□□□ -0.7
ANKRD39Q53RE8 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
ANKRD39Q53RE8 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
ANKRD39Q53RE8 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
ANKRD39Q53RE8 GRK7-201ENST00000264952 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
ANKRD39Q53RE8 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC10.67□□□□□ -0.7
ANKRD39Q53RE8 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
ANKRD39Q53RE8 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
ANKRD39Q53RE8 NLRX1-214ENST00000525863 2850 ntTSL 5 BASIC10.67□□□□□ -0.7
ANKRD39Q53RE8 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
ANKRD39Q53RE8 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
ANKRD39Q53RE8 AC025580.3-201ENST00000617932 1424 ntBASIC10.67□□□□□ -0.7
ANKRD39Q53RE8 SPIDR-206ENST00000518074 2819 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 AL132642.2-201ENST00000623423 1998 ntBASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 SMIM10L1-201ENST00000622602 4795 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 TUBGCP2-201ENST00000252936 3885 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 PLEKHG3-204ENST00000484731 3001 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 TNFSF10-202ENST00000420541 1619 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 STRAP-202ENST00000419869 1866 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 FAM234A-201ENST00000301678 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 AP2A1-201ENST00000354293 3388 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 TLE3-213ENST00000558379 2304 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 SSUH2-201ENST00000317371 2561 ntAPPRIS P3 TSL 2 BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 APOBEC3C-201ENST00000361441 2818 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 NEDD9-201ENST00000379433 3341 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 COX11P1-201ENST00000489116 835 ntBASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 TSPAN5-202ENST00000505184 1191 ntTSL 2 BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 AL031055.1-201ENST00000606362 631 ntBASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 CLN6-221ENST00000637494 765 ntTSL 5 BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 RASAL1-203ENST00000446861 3040 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 PCAT1-202ENST00000561978 1992 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 AL137127.1-201ENST00000606379 3402 ntBASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 SIGLEC11-203ENST00000447370 3173 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 TRAF3IP2-208ENST00000392556 2188 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 MISP-201ENST00000215582 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 PRMT2-205ENST00000397637 2880 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 PLA1A-206ENST00000495992 1695 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 EIF1B-AS1-205ENST00000629723 2399 ntTSL 3 BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 GOLGA8IP-202ENST00000611635 2100 ntBASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
ANKRD39Q53RE8 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
ANKRD39Q53RE8 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC10.65□□□□□ -0.7
ANKRD39Q53RE8 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
ANKRD39Q53RE8 LTF-201ENST00000231751 2979 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
ANKRD39Q53RE8 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
ANKRD39Q53RE8 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
ANKRD39Q53RE8 AC078842.2-201ENST00000447529 1835 ntTSL 2 BASIC10.65□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms