Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 MIR600HG-201ENST00000449175 5984 ntBASIC16.88■□□□□ 0.29
USH1GQ495M9 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.88■□□□□ 0.29
USH1GQ495M9 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
USH1GQ495M9 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
USH1GQ495M9 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
USH1GQ495M9 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
USH1GQ495M9 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
USH1GQ495M9 AL157791.1-201ENST00000553667 1699 ntBASIC16.88■□□□□ 0.29
USH1GQ495M9 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
USH1GQ495M9 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC16.87■□□□□ 0.29
USH1GQ495M9 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
USH1GQ495M9 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
USH1GQ495M9 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
USH1GQ495M9 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
USH1GQ495M9 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
USH1GQ495M9 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
USH1GQ495M9 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
USH1GQ495M9 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
USH1GQ495M9 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
USH1GQ495M9 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
USH1GQ495M9 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
USH1GQ495M9 AC007686.3-201ENST00000619017 3487 ntBASIC16.87■□□□□ 0.29
USH1GQ495M9 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.87■□□□□ 0.29
USH1GQ495M9 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC16.87■□□□□ 0.29
USH1GQ495M9 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
USH1GQ495M9 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
USH1GQ495M9 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC16.87■□□□□ 0.29
USH1GQ495M9 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC16.87■□□□□ 0.29
USH1GQ495M9 AL008707.1-201ENST00000422498 534 ntBASIC16.87■□□□□ 0.29
USH1GQ495M9 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
USH1GQ495M9 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
USH1GQ495M9 AC103988.2-201ENST00000561804 725 ntBASIC16.87■□□□□ 0.29
USH1GQ495M9 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC16.87■□□□□ 0.29
USH1GQ495M9 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
USH1GQ495M9 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
USH1GQ495M9 AP000346.4-201ENST00000614827 381 ntBASIC16.87■□□□□ 0.29
USH1GQ495M9 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC16.87■□□□□ 0.29
USH1GQ495M9 AC100757.4-201ENST00000626934 759 ntBASIC16.87■□□□□ 0.29
USH1GQ495M9 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC16.87■□□□□ 0.29
USH1GQ495M9 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC16.87■□□□□ 0.29
USH1GQ495M9 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.87■□□□□ 0.29
USH1GQ495M9 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
USH1GQ495M9 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
USH1GQ495M9 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
USH1GQ495M9 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
USH1GQ495M9 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
USH1GQ495M9 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.87■□□□□ 0.29
USH1GQ495M9 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
USH1GQ495M9 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
USH1GQ495M9 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
USH1GQ495M9 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
USH1GQ495M9 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
USH1GQ495M9 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.87■□□□□ 0.29
USH1GQ495M9 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
USH1GQ495M9 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
USH1GQ495M9 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC16.87■□□□□ 0.29
USH1GQ495M9 INTS4P1-203ENST00000641008 3683 ntBASIC16.86■□□□□ 0.29
USH1GQ495M9 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
USH1GQ495M9 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
USH1GQ495M9 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.86■□□□□ 0.29
USH1GQ495M9 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
USH1GQ495M9 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
USH1GQ495M9 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
USH1GQ495M9 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
USH1GQ495M9 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC16.86■□□□□ 0.29
USH1GQ495M9 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
USH1GQ495M9 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
USH1GQ495M9 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
USH1GQ495M9 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
USH1GQ495M9 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
USH1GQ495M9 RN7SKP214-201ENST00000364208 315 ntBASIC16.86■□□□□ 0.29
USH1GQ495M9 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC16.86■□□□□ 0.29
USH1GQ495M9 FADS2-212ENST00000522639 360 ntTSL 5 BASIC16.86■□□□□ 0.29
USH1GQ495M9 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC16.86■□□□□ 0.29
USH1GQ495M9 CHMP4BP1-201ENST00000556017 588 ntBASIC16.86■□□□□ 0.29
USH1GQ495M9 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
USH1GQ495M9 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC16.86■□□□□ 0.29
USH1GQ495M9 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC16.86■□□□□ 0.29
USH1GQ495M9 FADS2-215ENST00000574708 385 ntTSL 3 BASIC16.86■□□□□ 0.29
USH1GQ495M9 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC16.86■□□□□ 0.29
USH1GQ495M9 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC16.86■□□□□ 0.29
USH1GQ495M9 AC097724.1-201ENST00000609581 426 ntBASIC16.86■□□□□ 0.29
USH1GQ495M9 CU633904.3-201ENST00000624042 1029 ntBASIC16.86■□□□□ 0.29
USH1GQ495M9 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
USH1GQ495M9 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
USH1GQ495M9 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC16.86■□□□□ 0.29
USH1GQ495M9 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC16.86■□□□□ 0.29
USH1GQ495M9 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
USH1GQ495M9 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC16.86■□□□□ 0.29
USH1GQ495M9 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
USH1GQ495M9 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
USH1GQ495M9 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
USH1GQ495M9 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
USH1GQ495M9 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
USH1GQ495M9 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.86■□□□□ 0.29
USH1GQ495M9 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.86■□□□□ 0.29
USH1GQ495M9 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
USH1GQ495M9 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
USH1GQ495M9 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
USH1GQ495M9 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms