Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CD47Q08722 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
CD47Q08722 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD47Q08722 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD47Q08722 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD47Q08722 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD47Q08722 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD47Q08722 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CD47Q08722 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
CD47Q08722 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD47Q08722 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.77□□□□□ -0.21
CD47Q08722 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.77□□□□□ -0.21
CD47Q08722 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CD47Q08722 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.77□□□□□ -0.21
CD47Q08722 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC13.77□□□□□ -0.21
CD47Q08722 TSSK5P-201ENST00000423978 907 ntBASIC13.77□□□□□ -0.21
CD47Q08722 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD47Q08722 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.77□□□□□ -0.21
CD47Q08722 AC114501.2-201ENST00000439631 535 ntBASIC13.77□□□□□ -0.21
CD47Q08722 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.77□□□□□ -0.21
CD47Q08722 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC13.77□□□□□ -0.21
CD47Q08722 AC093214.1-201ENST00000511688 1107 ntBASIC13.77□□□□□ -0.21
CD47Q08722 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC13.77□□□□□ -0.21
CD47Q08722 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.77□□□□□ -0.21
CD47Q08722 AC135586.1-201ENST00000539323 574 ntBASIC13.77□□□□□ -0.21
CD47Q08722 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.77□□□□□ -0.21
CD47Q08722 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC13.77□□□□□ -0.21
CD47Q08722 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.77□□□□□ -0.21
CD47Q08722 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.77□□□□□ -0.21
CD47Q08722 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.77□□□□□ -0.21
CD47Q08722 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.77□□□□□ -0.21
CD47Q08722 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CD47Q08722 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD47Q08722 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD47Q08722 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CD47Q08722 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD47Q08722 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD47Q08722 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CD47Q08722 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD47Q08722 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
CD47Q08722 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD47Q08722 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD47Q08722 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD47Q08722 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CD47Q08722 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC13.76□□□□□ -0.21
CD47Q08722 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.76□□□□□ -0.21
CD47Q08722 AC022144.1-201ENST00000602255 1580 ntBASIC13.76□□□□□ -0.21
CD47Q08722 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD47Q08722 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CD47Q08722 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CD47Q08722 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.76□□□□□ -0.21
CD47Q08722 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC13.76□□□□□ -0.21
CD47Q08722 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC13.76□□□□□ -0.21
CD47Q08722 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
CD47Q08722 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.76□□□□□ -0.21
CD47Q08722 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CD47Q08722 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD47Q08722 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.76□□□□□ -0.21
CD47Q08722 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
CD47Q08722 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CD47Q08722 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CD47Q08722 BASP1P1-201ENST00000430708 665 ntBASIC13.76□□□□□ -0.21
CD47Q08722 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.76□□□□□ -0.21
CD47Q08722 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.76□□□□□ -0.21
CD47Q08722 AC009477.1-201ENST00000452936 217 ntBASIC13.76□□□□□ -0.21
CD47Q08722 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.76□□□□□ -0.21
CD47Q08722 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC13.76□□□□□ -0.21
CD47Q08722 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC13.76□□□□□ -0.21
CD47Q08722 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.76□□□□□ -0.21
CD47Q08722 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CD47Q08722 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.76□□□□□ -0.21
CD47Q08722 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CD47Q08722 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.76□□□□□ -0.21
CD47Q08722 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
CD47Q08722 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
CD47Q08722 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CD47Q08722 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CD47Q08722 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD47Q08722 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CD47Q08722 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD47Q08722 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CD47Q08722 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.76□□□□□ -0.21
CD47Q08722 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC13.76□□□□□ -0.21
CD47Q08722 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
CD47Q08722 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD47Q08722 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CD47Q08722 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC13.76□□□□□ -0.21
CD47Q08722 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CD47Q08722 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CD47Q08722 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CD47Q08722 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.75□□□□□ -0.21
CD47Q08722 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD47Q08722 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD47Q08722 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.75□□□□□ -0.21
CD47Q08722 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.75□□□□□ -0.21
CD47Q08722 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD47Q08722 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD47Q08722 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
CD47Q08722 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.75□□□□□ -0.21
CD47Q08722 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms