Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
DDR1Q08345 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
DDR1Q08345 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
DDR1Q08345 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
DDR1Q08345 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
DDR1Q08345 HYMAI-201ENST00000635591 3347 ntBASIC17.96■□□□□ 0.47
DDR1Q08345 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
DDR1Q08345 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC17.96■□□□□ 0.47
DDR1Q08345 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
DDR1Q08345 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
DDR1Q08345 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC17.96■□□□□ 0.47
DDR1Q08345 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
DDR1Q08345 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.46
DDR1Q08345 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DDR1Q08345 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC17.95■□□□□ 0.46
DDR1Q08345 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
DDR1Q08345 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.95■□□□□ 0.46
DDR1Q08345 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
DDR1Q08345 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
DDR1Q08345 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DDR1Q08345 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
DDR1Q08345 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DDR1Q08345 FUCA1P1-201ENST00000374476 1351 ntBASIC17.95■□□□□ 0.46
DDR1Q08345 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DDR1Q08345 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
DDR1Q08345 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
DDR1Q08345 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
DDR1Q08345 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DDR1Q08345 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DDR1Q08345 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC17.95■□□□□ 0.46
DDR1Q08345 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DDR1Q08345 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DDR1Q08345 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
DDR1Q08345 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DDR1Q08345 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
DDR1Q08345 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC17.95■□□□□ 0.46
DDR1Q08345 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC17.95■□□□□ 0.46
DDR1Q08345 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
DDR1Q08345 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC17.95■□□□□ 0.46
DDR1Q08345 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC17.95■□□□□ 0.46
DDR1Q08345 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DDR1Q08345 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC17.95■□□□□ 0.46
DDR1Q08345 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
DDR1Q08345 RPS23-207ENST00000511844 530 ntTSL 2 BASIC17.95■□□□□ 0.46
DDR1Q08345 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC17.95■□□□□ 0.46
DDR1Q08345 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC17.95■□□□□ 0.46
DDR1Q08345 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
DDR1Q08345 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC17.95■□□□□ 0.46
DDR1Q08345 NT5C-204ENST00000578337 582 ntTSL 2 BASIC17.95■□□□□ 0.46
DDR1Q08345 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC17.95■□□□□ 0.46
DDR1Q08345 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DDR1Q08345 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
DDR1Q08345 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DDR1Q08345 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DDR1Q08345 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DDR1Q08345 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DDR1Q08345 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
DDR1Q08345 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DDR1Q08345 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.95■□□□□ 0.46
DDR1Q08345 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC17.95■□□□□ 0.46
DDR1Q08345 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DDR1Q08345 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
DDR1Q08345 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
DDR1Q08345 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC17.95■□□□□ 0.46
DDR1Q08345 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
DDR1Q08345 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
DDR1Q08345 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
DDR1Q08345 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DDR1Q08345 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
DDR1Q08345 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
DDR1Q08345 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DDR1Q08345 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.94■□□□□ 0.46
DDR1Q08345 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
DDR1Q08345 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC17.94■□□□□ 0.46
DDR1Q08345 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
DDR1Q08345 PTGER4P2-201ENST00000328411 252 ntBASIC17.94■□□□□ 0.46
DDR1Q08345 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
DDR1Q08345 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
DDR1Q08345 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC17.94■□□□□ 0.46
DDR1Q08345 PPP1R2P4-201ENST00000424051 595 ntBASIC17.94■□□□□ 0.46
DDR1Q08345 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC17.94■□□□□ 0.46
DDR1Q08345 PTGER4P3-201ENST00000458150 252 ntBASIC17.94■□□□□ 0.46
DDR1Q08345 RBM4-207ENST00000506523 654 ntTSL 3 BASIC17.94■□□□□ 0.46
DDR1Q08345 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC17.94■□□□□ 0.46
DDR1Q08345 KLF17P1-201ENST00000547105 1126 ntBASIC17.94■□□□□ 0.46
DDR1Q08345 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC17.94■□□□□ 0.46
DDR1Q08345 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC17.94■□□□□ 0.46
DDR1Q08345 MT2A-202ENST00000561491 581 ntTSL 2 BASIC17.94■□□□□ 0.46
DDR1Q08345 AC140658.4-201ENST00000561990 352 ntBASIC17.94■□□□□ 0.46
DDR1Q08345 MIR5001-201ENST00000580185 100 ntBASIC17.94■□□□□ 0.46
DDR1Q08345 AC021016.3-201ENST00000608367 477 ntBASIC17.94■□□□□ 0.46
DDR1Q08345 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC17.94■□□□□ 0.46
DDR1Q08345 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC17.94■□□□□ 0.46
DDR1Q08345 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
DDR1Q08345 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC17.94■□□□□ 0.46
DDR1Q08345 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC17.94■□□□□ 0.46
DDR1Q08345 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DDR1Q08345 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
DDR1Q08345 TMBIM7P-203ENST00000641617 1718 ntBASIC17.94■□□□□ 0.46
DDR1Q08345 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms