Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NKX6-1P78426 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.11□□□□□ -0.31
NKX6-1P78426 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC13.11□□□□□ -0.31
NKX6-1P78426 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.11□□□□□ -0.31
NKX6-1P78426 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.11□□□□□ -0.31
NKX6-1P78426 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC13.11□□□□□ -0.31
NKX6-1P78426 AC022616.1-201ENST00000518688 554 ntBASIC13.11□□□□□ -0.31
NKX6-1P78426 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC13.11□□□□□ -0.31
NKX6-1P78426 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC13.11□□□□□ -0.31
NKX6-1P78426 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX6-1P78426 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC13.11□□□□□ -0.31
NKX6-1P78426 AC105129.2-201ENST00000559536 390 ntBASIC13.11□□□□□ -0.31
NKX6-1P78426 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
NKX6-1P78426 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC13.11□□□□□ -0.31
NKX6-1P78426 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC13.11□□□□□ -0.31
NKX6-1P78426 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NKX6-1P78426 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC13.11□□□□□ -0.31
NKX6-1P78426 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.11□□□□□ -0.31
NKX6-1P78426 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX6-1P78426 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX6-1P78426 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
NKX6-1P78426 LRRC59-203ENST00000576448 1531 ntBASIC13.11□□□□□ -0.31
NKX6-1P78426 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX6-1P78426 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX6-1P78426 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX6-1P78426 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
NKX6-1P78426 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NKX6-1P78426 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NKX6-1P78426 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.11□□□□□ -0.31
NKX6-1P78426 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
NKX6-1P78426 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX6-1P78426 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX6-1P78426 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX6-1P78426 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
NKX6-1P78426 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NKX6-1P78426 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.1□□□□□ -0.31
NKX6-1P78426 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NKX6-1P78426 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.1□□□□□ -0.31
NKX6-1P78426 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX6-1P78426 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
NKX6-1P78426 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.1□□□□□ -0.31
NKX6-1P78426 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.1□□□□□ -0.31
NKX6-1P78426 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX6-1P78426 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NKX6-1P78426 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
NKX6-1P78426 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
NKX6-1P78426 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX6-1P78426 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX6-1P78426 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX6-1P78426 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
NKX6-1P78426 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NKX6-1P78426 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NKX6-1P78426 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.1□□□□□ -0.31
NKX6-1P78426 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
NKX6-1P78426 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
NKX6-1P78426 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC13.1□□□□□ -0.31
NKX6-1P78426 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX6-1P78426 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX6-1P78426 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX6-1P78426 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX6-1P78426 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
NKX6-1P78426 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.1□□□□□ -0.31
NKX6-1P78426 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
NKX6-1P78426 FXNP2-201ENST00000411625 547 ntBASIC13.1□□□□□ -0.31
NKX6-1P78426 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC13.1□□□□□ -0.31
NKX6-1P78426 EIF3FP3-201ENST00000434851 1086 ntBASIC13.1□□□□□ -0.31
NKX6-1P78426 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
NKX6-1P78426 RN7SL769P-201ENST00000469386 295 ntBASIC13.1□□□□□ -0.31
NKX6-1P78426 HIST2H2BC-201ENST00000498492 580 ntBASIC13.1□□□□□ -0.31
NKX6-1P78426 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
NKX6-1P78426 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.1□□□□□ -0.31
NKX6-1P78426 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC13.1□□□□□ -0.31
NKX6-1P78426 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC13.1□□□□□ -0.31
NKX6-1P78426 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
NKX6-1P78426 DUX4L47-201ENST00000566374 394 ntBASIC13.1□□□□□ -0.31
NKX6-1P78426 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.1□□□□□ -0.31
NKX6-1P78426 RN7SL48P-201ENST00000579283 293 ntBASIC13.1□□□□□ -0.31
NKX6-1P78426 AC006453.4-201ENST00000636949 1252 ntBASIC13.1□□□□□ -0.31
NKX6-1P78426 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX6-1P78426 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX6-1P78426 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NKX6-1P78426 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.1□□□□□ -0.31
NKX6-1P78426 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NKX6-1P78426 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.1□□□□□ -0.31
NKX6-1P78426 AC023024.2-201ENST00000623561 1993 ntBASIC13.1□□□□□ -0.31
NKX6-1P78426 MROH4P-201ENST00000431302 1578 ntBASIC13.1□□□□□ -0.31
NKX6-1P78426 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
NKX6-1P78426 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.1□□□□□ -0.31
NKX6-1P78426 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX6-1P78426 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.1□□□□□ -0.31
NKX6-1P78426 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX6-1P78426 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
NKX6-1P78426 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
NKX6-1P78426 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX6-1P78426 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NKX6-1P78426 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NKX6-1P78426 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX6-1P78426 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
NKX6-1P78426 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
NKX6-1P78426 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms