Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC16.6■□□□□ 0.25
CCNA1P78396 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CCNA1P78396 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC16.6■□□□□ 0.25
CCNA1P78396 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.6■□□□□ 0.25
CCNA1P78396 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCNA1P78396 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCNA1P78396 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC16.6■□□□□ 0.25
CCNA1P78396 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CCNA1P78396 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCNA1P78396 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCNA1P78396 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CCNA1P78396 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCNA1P78396 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.59■□□□□ 0.25
CCNA1P78396 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCNA1P78396 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCNA1P78396 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCNA1P78396 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC16.59■□□□□ 0.25
CCNA1P78396 HYMAI-201ENST00000635591 3347 ntBASIC16.59■□□□□ 0.25
CCNA1P78396 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCNA1P78396 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC16.59■□□□□ 0.25
CCNA1P78396 CICP23-201ENST00000605013 2741 ntBASIC16.59■□□□□ 0.25
CCNA1P78396 AL162727.3-201ENST00000635661 2787 ntBASIC16.59■□□□□ 0.25
CCNA1P78396 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCNA1P78396 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCNA1P78396 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCNA1P78396 BAK1P1-201ENST00000317045 636 ntBASIC16.59■□□□□ 0.25
CCNA1P78396 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CCNA1P78396 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCNA1P78396 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
CCNA1P78396 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC16.59■□□□□ 0.25
CCNA1P78396 RPS23-204ENST00000507980 836 ntTSL 2 BASIC16.59■□□□□ 0.25
CCNA1P78396 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC16.59■□□□□ 0.25
CCNA1P78396 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC16.59■□□□□ 0.25
CCNA1P78396 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC16.59■□□□□ 0.25
CCNA1P78396 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC16.59■□□□□ 0.25
CCNA1P78396 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC16.59■□□□□ 0.25
CCNA1P78396 TEKT4P2-202ENST00000559466 1312 ntBASIC16.59■□□□□ 0.25
CCNA1P78396 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCNA1P78396 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
CCNA1P78396 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCNA1P78396 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CCNA1P78396 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCNA1P78396 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCNA1P78396 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCNA1P78396 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCNA1P78396 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC16.59■□□□□ 0.25
CCNA1P78396 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCNA1P78396 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC16.59■□□□□ 0.25
CCNA1P78396 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC16.59■□□□□ 0.25
CCNA1P78396 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CCNA1P78396 ACE3P-201ENST00000423435 1973 ntBASIC16.58■□□□□ 0.25
CCNA1P78396 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
CCNA1P78396 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.58■□□□□ 0.25
CCNA1P78396 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CCNA1P78396 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CCNA1P78396 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CCNA1P78396 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCNA1P78396 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CCNA1P78396 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.58■□□□□ 0.24
CCNA1P78396 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCNA1P78396 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCNA1P78396 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCNA1P78396 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCNA1P78396 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CCNA1P78396 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC16.58■□□□□ 0.24
CCNA1P78396 GUSBP10-201ENST00000417412 665 ntBASIC16.58■□□□□ 0.24
CCNA1P78396 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC16.58■□□□□ 0.24
CCNA1P78396 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC16.58■□□□□ 0.24
CCNA1P78396 AC004837.1-201ENST00000446267 564 ntBASIC16.58■□□□□ 0.24
CCNA1P78396 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC16.58■□□□□ 0.24
CCNA1P78396 HERC2P11-201ENST00000562845 725 ntBASIC16.58■□□□□ 0.24
CCNA1P78396 AC100756.2-201ENST00000569537 736 ntBASIC16.58■□□□□ 0.24
CCNA1P78396 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC16.58■□□□□ 0.24
CCNA1P78396 DBP-202ENST00000593500 712 ntTSL 2 BASIC16.58■□□□□ 0.24
CCNA1P78396 AC021016.3-201ENST00000608367 477 ntBASIC16.58■□□□□ 0.24
CCNA1P78396 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCNA1P78396 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC16.58■□□□□ 0.24
CCNA1P78396 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CCNA1P78396 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCNA1P78396 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCNA1P78396 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCNA1P78396 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCNA1P78396 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC16.58■□□□□ 0.24
CCNA1P78396 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCNA1P78396 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC16.58■□□□□ 0.24
CCNA1P78396 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC16.58■□□□□ 0.24
CCNA1P78396 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CCNA1P78396 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCNA1P78396 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCNA1P78396 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.58■□□□□ 0.24
CCNA1P78396 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCNA1P78396 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CCNA1P78396 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC16.58■□□□□ 0.24
CCNA1P78396 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCNA1P78396 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCNA1P78396 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCNA1P78396 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.58■□□□□ 0.24
CCNA1P78396 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.58■□□□□ 0.24
CCNA1P78396 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCNA1P78396 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms