Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UBA52P62987 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC12.85□□□□□ -0.35
UBA52P62987 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UBA52P62987 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UBA52P62987 CLK3P2-201ENST00000427566 1453 ntBASIC12.85□□□□□ -0.35
UBA52P62987 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
UBA52P62987 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC12.85□□□□□ -0.35
UBA52P62987 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
UBA52P62987 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UBA52P62987 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
UBA52P62987 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UBA52P62987 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UBA52P62987 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.85□□□□□ -0.35
UBA52P62987 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC12.85□□□□□ -0.35
UBA52P62987 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.85□□□□□ -0.35
UBA52P62987 FLII-221ENST00000578558 2377 ntTSL 5 BASIC12.85□□□□□ -0.35
UBA52P62987 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
UBA52P62987 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC12.85□□□□□ -0.35
UBA52P62987 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
UBA52P62987 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UBA52P62987 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
UBA52P62987 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC12.85□□□□□ -0.35
UBA52P62987 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UBA52P62987 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UBA52P62987 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC12.85□□□□□ -0.35
UBA52P62987 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
UBA52P62987 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
UBA52P62987 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC12.85□□□□□ -0.35
UBA52P62987 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC12.85□□□□□ -0.35
UBA52P62987 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC12.85□□□□□ -0.35
UBA52P62987 MIR4259-201ENST00000584466 101 ntBASIC12.85□□□□□ -0.35
UBA52P62987 AC008735.3-201ENST00000596646 500 ntBASIC12.85□□□□□ -0.35
UBA52P62987 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
UBA52P62987 MIR8072-201ENST00000614241 80 ntBASIC12.85□□□□□ -0.35
UBA52P62987 AL033527.4-201ENST00000641026 673 ntBASIC12.85□□□□□ -0.35
UBA52P62987 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
UBA52P62987 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UBA52P62987 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UBA52P62987 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
UBA52P62987 DEK-201ENST00000244776 1441 ntTSL 2 BASIC12.85□□□□□ -0.35
UBA52P62987 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UBA52P62987 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC12.85□□□□□ -0.35
UBA52P62987 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UBA52P62987 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
UBA52P62987 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC12.85□□□□□ -0.35
UBA52P62987 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UBA52P62987 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
UBA52P62987 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC12.85□□□□□ -0.35
UBA52P62987 PCDHGB8P-201ENST00000502926 1973 ntBASIC12.85□□□□□ -0.35
UBA52P62987 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UBA52P62987 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
UBA52P62987 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
UBA52P62987 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UBA52P62987 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC12.85□□□□□ -0.35
UBA52P62987 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UBA52P62987 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
UBA52P62987 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
UBA52P62987 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
UBA52P62987 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
UBA52P62987 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
UBA52P62987 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
UBA52P62987 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
UBA52P62987 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
UBA52P62987 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
UBA52P62987 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC12.84□□□□□ -0.35
UBA52P62987 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC12.84□□□□□ -0.35
UBA52P62987 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
UBA52P62987 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC12.84□□□□□ -0.35
UBA52P62987 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC12.84□□□□□ -0.35
UBA52P62987 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
UBA52P62987 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC12.84□□□□□ -0.35
UBA52P62987 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
UBA52P62987 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
UBA52P62987 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
UBA52P62987 NSL1-201ENST00000366976 722 ntTSL 2 BASIC12.84□□□□□ -0.35
UBA52P62987 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
UBA52P62987 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
UBA52P62987 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
UBA52P62987 KRT43P-201ENST00000434019 910 ntBASIC12.84□□□□□ -0.35
UBA52P62987 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC12.84□□□□□ -0.35
UBA52P62987 RHOA-206ENST00000454011 889 ntTSL 2 BASIC12.84□□□□□ -0.35
UBA52P62987 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC12.84□□□□□ -0.35
UBA52P62987 AC119751.2-201ENST00000504529 210 ntBASIC12.84□□□□□ -0.35
UBA52P62987 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC12.84□□□□□ -0.35
UBA52P62987 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC12.84□□□□□ -0.35
UBA52P62987 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
UBA52P62987 RARRES2P5-201ENST00000564013 466 ntBASIC12.84□□□□□ -0.35
UBA52P62987 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC12.84□□□□□ -0.35
UBA52P62987 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC12.84□□□□□ -0.35
UBA52P62987 AC025048.3-201ENST00000590609 569 ntBASIC12.84□□□□□ -0.35
UBA52P62987 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
UBA52P62987 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
UBA52P62987 AC005702.4-201ENST00000618393 416 ntBASIC12.84□□□□□ -0.35
UBA52P62987 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC12.84□□□□□ -0.35
UBA52P62987 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC12.84□□□□□ -0.35
UBA52P62987 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
UBA52P62987 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
UBA52P62987 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
UBA52P62987 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
UBA52P62987 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms