Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC12.89□□□□□ -0.35
CLDN12P56749 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC12.89□□□□□ -0.35
CLDN12P56749 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC12.89□□□□□ -0.35
CLDN12P56749 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC12.89□□□□□ -0.35
CLDN12P56749 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
CLDN12P56749 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC12.89□□□□□ -0.35
CLDN12P56749 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC12.89□□□□□ -0.35
CLDN12P56749 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN12P56749 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC12.89□□□□□ -0.35
CLDN12P56749 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC12.89□□□□□ -0.35
CLDN12P56749 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN12P56749 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN12P56749 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC12.89□□□□□ -0.35
CLDN12P56749 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN12P56749 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN12P56749 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
CLDN12P56749 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.89□□□□□ -0.35
CLDN12P56749 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
CLDN12P56749 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN12P56749 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.89□□□□□ -0.35
CLDN12P56749 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN12P56749 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN12P56749 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN12P56749 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN12P56749 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN12P56749 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CLDN12P56749 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CLDN12P56749 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
CLDN12P56749 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN12P56749 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC12.88□□□□□ -0.35
CLDN12P56749 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
CLDN12P56749 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN12P56749 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN12P56749 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.88□□□□□ -0.35
CLDN12P56749 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC12.88□□□□□ -0.35
CLDN12P56749 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN12P56749 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC12.88□□□□□ -0.35
CLDN12P56749 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN12P56749 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.88□□□□□ -0.35
CLDN12P56749 DDC-213ENST00000617822 1809 ntTSL 3 BASIC12.88□□□□□ -0.35
CLDN12P56749 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN12P56749 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN12P56749 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC12.88□□□□□ -0.35
CLDN12P56749 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
CLDN12P56749 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC12.88□□□□□ -0.35
CLDN12P56749 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN12P56749 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN12P56749 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN12P56749 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
CLDN12P56749 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN12P56749 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CLDN12P56749 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN12P56749 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN12P56749 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CLDN12P56749 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN12P56749 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN12P56749 MIR574-201ENST00000385209 96 ntBASIC12.88□□□□□ -0.35
CLDN12P56749 FABP5-202ENST00000396359 986 ntTSL 5 BASIC12.88□□□□□ -0.35
CLDN12P56749 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC12.88□□□□□ -0.35
CLDN12P56749 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC12.88□□□□□ -0.35
CLDN12P56749 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN12P56749 AL353779.1-201ENST00000434793 351 ntBASIC12.88□□□□□ -0.35
CLDN12P56749 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC12.88□□□□□ -0.35
CLDN12P56749 YBX1P5-201ENST00000509441 847 ntBASIC12.88□□□□□ -0.35
CLDN12P56749 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN12P56749 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN12P56749 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC12.88□□□□□ -0.35
CLDN12P56749 TIMM17BP1-201ENST00000545713 516 ntBASIC12.88□□□□□ -0.35
CLDN12P56749 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC12.88□□□□□ -0.35
CLDN12P56749 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC12.88□□□□□ -0.35
CLDN12P56749 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC12.88□□□□□ -0.35
CLDN12P56749 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC12.88□□□□□ -0.35
CLDN12P56749 AL121894.2-201ENST00000602977 491 ntBASIC12.88□□□□□ -0.35
CLDN12P56749 AL158212.4-201ENST00000624062 1286 ntBASIC12.88□□□□□ -0.35
CLDN12P56749 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC12.88□□□□□ -0.35
CLDN12P56749 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN12P56749 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC12.88□□□□□ -0.35
CLDN12P56749 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN12P56749 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC12.88□□□□□ -0.35
CLDN12P56749 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN12P56749 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC12.88□□□□□ -0.35
CLDN12P56749 AC015909.5-201ENST00000624336 2266 ntBASIC12.88□□□□□ -0.35
CLDN12P56749 AL157996.1-201ENST00000624684 2299 ntBASIC12.88□□□□□ -0.35
CLDN12P56749 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC12.88□□□□□ -0.35
CLDN12P56749 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN12P56749 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
CLDN12P56749 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN12P56749 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN12P56749 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
CLDN12P56749 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN12P56749 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN12P56749 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN12P56749 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC12.88□□□□□ -0.35
CLDN12P56749 TUBB3P1-201ENST00000405796 1332 ntBASIC12.88□□□□□ -0.35
CLDN12P56749 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CLDN12P56749 AL445209.1-201ENST00000607269 3491 ntBASIC12.87□□□□□ -0.35
CLDN12P56749 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
CLDN12P56749 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN12P56749 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN12P56749 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms