Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC14.9□□□□□ -0.02
LIMK2P53671 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LIMK2P53671 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.9□□□□□ -0.02
LIMK2P53671 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LIMK2P53671 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LIMK2P53671 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LIMK2P53671 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
LIMK2P53671 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LIMK2P53671 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
LIMK2P53671 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LIMK2P53671 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LIMK2P53671 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.9□□□□□ -0.02
LIMK2P53671 YBX1P6-201ENST00000442962 1002 ntBASIC14.9□□□□□ -0.02
LIMK2P53671 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC14.9□□□□□ -0.02
LIMK2P53671 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC14.9□□□□□ -0.02
LIMK2P53671 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.9□□□□□ -0.02
LIMK2P53671 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
LIMK2P53671 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.9□□□□□ -0.02
LIMK2P53671 LARP4-220ENST00000615080 856 ntTSL 5 BASIC14.9□□□□□ -0.02
LIMK2P53671 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.9□□□□□ -0.02
LIMK2P53671 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
LIMK2P53671 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LIMK2P53671 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
LIMK2P53671 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LIMK2P53671 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.9□□□□□ -0.02
LIMK2P53671 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
LIMK2P53671 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.9□□□□□ -0.02
LIMK2P53671 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LIMK2P53671 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.9□□□□□ -0.02
LIMK2P53671 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LIMK2P53671 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
LIMK2P53671 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LIMK2P53671 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LIMK2P53671 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LIMK2P53671 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.9□□□□□ -0.02
LIMK2P53671 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
LIMK2P53671 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
LIMK2P53671 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.9□□□□□ -0.02
LIMK2P53671 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC14.9□□□□□ -0.02
LIMK2P53671 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LIMK2P53671 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LIMK2P53671 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.89□□□□□ -0.03
LIMK2P53671 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LIMK2P53671 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LIMK2P53671 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LIMK2P53671 AL365209.1-201ENST00000624418 6473 ntBASIC14.89□□□□□ -0.03
LIMK2P53671 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LIMK2P53671 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.89□□□□□ -0.03
LIMK2P53671 MYADML-201ENST00000474610 2147 ntBASIC14.89□□□□□ -0.03
LIMK2P53671 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
LIMK2P53671 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.89□□□□□ -0.03
LIMK2P53671 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.89□□□□□ -0.03
LIMK2P53671 INE2-201ENST00000630399 1874 ntBASIC14.89□□□□□ -0.03
LIMK2P53671 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LIMK2P53671 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LIMK2P53671 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LIMK2P53671 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
LIMK2P53671 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
LIMK2P53671 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LIMK2P53671 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LIMK2P53671 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LIMK2P53671 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.89□□□□□ -0.03
LIMK2P53671 BRWD1P1-201ENST00000401091 371 ntBASIC14.89□□□□□ -0.03
LIMK2P53671 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.89□□□□□ -0.03
LIMK2P53671 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC14.89□□□□□ -0.03
LIMK2P53671 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
LIMK2P53671 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.89□□□□□ -0.03
LIMK2P53671 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LIMK2P53671 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC14.89□□□□□ -0.03
LIMK2P53671 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC14.89□□□□□ -0.03
LIMK2P53671 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC14.89□□□□□ -0.03
LIMK2P53671 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LIMK2P53671 KRT18P25-201ENST00000508931 1278 ntBASIC14.89□□□□□ -0.03
LIMK2P53671 FAM8A2P-201ENST00000528813 1142 ntBASIC14.89□□□□□ -0.03
LIMK2P53671 NOP2-211ENST00000540228 668 ntTSL 2 BASIC14.89□□□□□ -0.03
LIMK2P53671 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LIMK2P53671 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.89□□□□□ -0.03
LIMK2P53671 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
LIMK2P53671 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.89□□□□□ -0.03
LIMK2P53671 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LIMK2P53671 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.89□□□□□ -0.03
LIMK2P53671 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.89□□□□□ -0.03
LIMK2P53671 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LIMK2P53671 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LIMK2P53671 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LIMK2P53671 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.89□□□□□ -0.03
LIMK2P53671 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LIMK2P53671 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LIMK2P53671 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LIMK2P53671 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
LIMK2P53671 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LIMK2P53671 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LIMK2P53671 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LIMK2P53671 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LIMK2P53671 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
LIMK2P53671 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
LIMK2P53671 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LIMK2P53671 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.88□□□□□ -0.03
LIMK2P53671 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.88□□□□□ -0.03
LIMK2P53671 AC012617.1-204ENST00000586340 2305 ntBASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms