Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.51□□□□□ -0.09
LIMK1P53667 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LIMK1P53667 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LIMK1P53667 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LIMK1P53667 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LIMK1P53667 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
LIMK1P53667 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LIMK1P53667 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LIMK1P53667 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.51□□□□□ -0.09
LIMK1P53667 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
LIMK1P53667 NHP2-202ENST00000314397 599 ntTSL 2 BASIC14.51□□□□□ -0.09
LIMK1P53667 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC14.51□□□□□ -0.09
LIMK1P53667 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LIMK1P53667 HCG27-204ENST00000424675 895 ntTSL 3 BASIC14.51□□□□□ -0.09
LIMK1P53667 AC026434.2-201ENST00000506094 1078 ntBASIC14.51□□□□□ -0.09
LIMK1P53667 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LIMK1P53667 MIR5196-201ENST00000578146 115 ntBASIC14.51□□□□□ -0.09
LIMK1P53667 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC14.51□□□□□ -0.09
LIMK1P53667 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC14.51□□□□□ -0.09
LIMK1P53667 AC005962.1-201ENST00000584100 773 ntBASIC14.51□□□□□ -0.09
LIMK1P53667 MIR4522-201ENST00000584932 87 ntBASIC14.51□□□□□ -0.09
LIMK1P53667 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC14.51□□□□□ -0.09
LIMK1P53667 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
LIMK1P53667 AC011247.3-201ENST00000603297 438 ntBASIC14.51□□□□□ -0.09
LIMK1P53667 AC073592.2-201ENST00000623062 780 ntBASIC14.51□□□□□ -0.09
LIMK1P53667 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC14.51□□□□□ -0.09
LIMK1P53667 LINC00431-202ENST00000636375 159 ntBASIC14.51□□□□□ -0.09
LIMK1P53667 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.51□□□□□ -0.09
LIMK1P53667 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
LIMK1P53667 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
LIMK1P53667 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LIMK1P53667 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
LIMK1P53667 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LIMK1P53667 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LIMK1P53667 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
LIMK1P53667 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.51□□□□□ -0.09
LIMK1P53667 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
LIMK1P53667 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
LIMK1P53667 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
LIMK1P53667 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LIMK1P53667 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
LIMK1P53667 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.51□□□□□ -0.09
LIMK1P53667 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LIMK1P53667 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
LIMK1P53667 NFIC-211ENST00000641145 8399 ntBASIC14.5□□□□□ -0.09
LIMK1P53667 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LIMK1P53667 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LIMK1P53667 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LIMK1P53667 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC14.5□□□□□ -0.09
LIMK1P53667 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
LIMK1P53667 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LIMK1P53667 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LIMK1P53667 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LIMK1P53667 AGAP7P-201ENST00000582299 2062 ntBASIC14.5□□□□□ -0.09
LIMK1P53667 AGAP14-201ENST00000624701 2060 ntBASIC14.5□□□□□ -0.09
LIMK1P53667 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LIMK1P53667 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LIMK1P53667 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LIMK1P53667 HIST2H2BA-201ENST00000412169 381 ntBASIC14.5□□□□□ -0.09
LIMK1P53667 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.5□□□□□ -0.09
LIMK1P53667 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC14.5□□□□□ -0.09
LIMK1P53667 GCSHP3-201ENST00000431120 391 ntBASIC14.5□□□□□ -0.09
LIMK1P53667 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC14.5□□□□□ -0.09
LIMK1P53667 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.5□□□□□ -0.09
LIMK1P53667 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC14.5□□□□□ -0.09
LIMK1P53667 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC14.5□□□□□ -0.09
LIMK1P53667 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC14.5□□□□□ -0.09
LIMK1P53667 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.5□□□□□ -0.09
LIMK1P53667 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC14.5□□□□□ -0.09
LIMK1P53667 AC027237.1-201ENST00000560942 655 ntBASIC14.5□□□□□ -0.09
LIMK1P53667 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
LIMK1P53667 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
LIMK1P53667 MIR4472-1-201ENST00000584349 80 ntBASIC14.5□□□□□ -0.09
LIMK1P53667 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC14.5□□□□□ -0.09
LIMK1P53667 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC14.5□□□□□ -0.09
LIMK1P53667 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC14.5□□□□□ -0.09
LIMK1P53667 AC107464.3-201ENST00000609172 737 ntBASIC14.5□□□□□ -0.09
LIMK1P53667 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LIMK1P53667 AC005618.3-201ENST00000624928 458 ntBASIC14.5□□□□□ -0.09
LIMK1P53667 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LIMK1P53667 AP001184.1-201ENST00000637936 376 ntBASIC14.5□□□□□ -0.09
LIMK1P53667 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC14.5□□□□□ -0.09
LIMK1P53667 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
LIMK1P53667 AC084364.1-201ENST00000551967 1556 ntBASIC14.5□□□□□ -0.09
LIMK1P53667 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.5□□□□□ -0.09
LIMK1P53667 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LIMK1P53667 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LIMK1P53667 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LIMK1P53667 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LIMK1P53667 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.5□□□□□ -0.09
LIMK1P53667 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LIMK1P53667 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LIMK1P53667 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.5□□□□□ -0.09
LIMK1P53667 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LIMK1P53667 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LIMK1P53667 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LIMK1P53667 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LIMK1P53667 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LIMK1P53667 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LIMK1P53667 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms