Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDK7P50613 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDK7P50613 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDK7P50613 REXO1L2P-201ENST00000425429 2069 ntBASIC16.2■□□□□ 0.18
CDK7P50613 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
CDK7P50613 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
CDK7P50613 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.2■□□□□ 0.18
CDK7P50613 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDK7P50613 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDK7P50613 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDK7P50613 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC16.19■□□□□ 0.18
CDK7P50613 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC16.19■□□□□ 0.18
CDK7P50613 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CDK7P50613 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.19■□□□□ 0.18
CDK7P50613 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CDK7P50613 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDK7P50613 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
CDK7P50613 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDK7P50613 PRAL-201ENST00000624952 3286 ntBASIC16.19■□□□□ 0.18
CDK7P50613 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDK7P50613 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDK7P50613 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CDK7P50613 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDK7P50613 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.19■□□□□ 0.18
CDK7P50613 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDK7P50613 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC16.19■□□□□ 0.18
CDK7P50613 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CDK7P50613 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDK7P50613 BAK1P1-201ENST00000317045 636 ntBASIC16.19■□□□□ 0.18
CDK7P50613 HLA-DMA-203ENST00000395305 777 ntBASIC16.19■□□□□ 0.18
CDK7P50613 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC16.19■□□□□ 0.18
CDK7P50613 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDK7P50613 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC16.19■□□□□ 0.18
CDK7P50613 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDK7P50613 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC16.19■□□□□ 0.18
CDK7P50613 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC16.19■□□□□ 0.18
CDK7P50613 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CDK7P50613 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CDK7P50613 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDK7P50613 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
CDK7P50613 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CDK7P50613 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC16.19■□□□□ 0.18
CDK7P50613 AC013268.4-201ENST00000637413 2228 ntBASIC16.19■□□□□ 0.18
CDK7P50613 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDK7P50613 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDK7P50613 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CDK7P50613 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDK7P50613 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDK7P50613 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDK7P50613 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.19■□□□□ 0.18
CDK7P50613 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDK7P50613 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CDK7P50613 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.19■□□□□ 0.18
CDK7P50613 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDK7P50613 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDK7P50613 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.18■□□□□ 0.18
CDK7P50613 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDK7P50613 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDK7P50613 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CDK7P50613 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.18■□□□□ 0.18
CDK7P50613 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDK7P50613 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDK7P50613 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC16.18■□□□□ 0.18
CDK7P50613 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CDK7P50613 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDK7P50613 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDK7P50613 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC16.18■□□□□ 0.18
CDK7P50613 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC16.18■□□□□ 0.18
CDK7P50613 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDK7P50613 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDK7P50613 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC16.18■□□□□ 0.18
CDK7P50613 AL357563.1-201ENST00000404728 395 ntBASIC16.18■□□□□ 0.18
CDK7P50613 AC092638.2-201ENST00000441105 947 ntBASIC16.18■□□□□ 0.18
CDK7P50613 OR2R1P-201ENST00000441404 914 ntBASIC16.18■□□□□ 0.18
CDK7P50613 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC16.18■□□□□ 0.18
CDK7P50613 DUX4L50-201ENST00000455245 715 ntBASIC16.18■□□□□ 0.18
CDK7P50613 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CDK7P50613 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC16.18■□□□□ 0.18
CDK7P50613 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC16.18■□□□□ 0.18
CDK7P50613 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDK7P50613 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CDK7P50613 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC16.18■□□□□ 0.18
CDK7P50613 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
CDK7P50613 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDK7P50613 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDK7P50613 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.18■□□□□ 0.18
CDK7P50613 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.18■□□□□ 0.18
CDK7P50613 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDK7P50613 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDK7P50613 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.18■□□□□ 0.18
CDK7P50613 IL9RP3-201ENST00000442856 1674 ntBASIC16.18■□□□□ 0.18
CDK7P50613 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDK7P50613 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDK7P50613 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.17■□□□□ 0.18
CDK7P50613 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDK7P50613 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDK7P50613 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CDK7P50613 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDK7P50613 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.17■□□□□ 0.18
CDK7P50613 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms