Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
CSNK1DP48730 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CSNK1DP48730 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSNK1DP48730 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSNK1DP48730 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CSNK1DP48730 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.7□□□□□ -0.06
CSNK1DP48730 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSNK1DP48730 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CSNK1DP48730 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSNK1DP48730 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSNK1DP48730 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSNK1DP48730 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSNK1DP48730 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSNK1DP48730 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSNK1DP48730 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
CSNK1DP48730 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSNK1DP48730 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.69□□□□□ -0.06
CSNK1DP48730 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.69□□□□□ -0.06
CSNK1DP48730 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CSNK1DP48730 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.69□□□□□ -0.06
CSNK1DP48730 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSNK1DP48730 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSNK1DP48730 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CSNK1DP48730 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSNK1DP48730 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.69□□□□□ -0.06
CSNK1DP48730 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CSNK1DP48730 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC14.69□□□□□ -0.06
CSNK1DP48730 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSNK1DP48730 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
CSNK1DP48730 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSNK1DP48730 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC14.69□□□□□ -0.06
CSNK1DP48730 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSNK1DP48730 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CSNK1DP48730 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC14.69□□□□□ -0.06
CSNK1DP48730 PGAM1P5-201ENST00000548011 764 ntBASIC14.69□□□□□ -0.06
CSNK1DP48730 AC103810.3-201ENST00000583567 96 ntBASIC14.69□□□□□ -0.06
CSNK1DP48730 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSNK1DP48730 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC14.69□□□□□ -0.06
CSNK1DP48730 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC14.69□□□□□ -0.06
CSNK1DP48730 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSNK1DP48730 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSNK1DP48730 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSNK1DP48730 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSNK1DP48730 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSNK1DP48730 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSNK1DP48730 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CSNK1DP48730 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CSNK1DP48730 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.69□□□□□ -0.06
CSNK1DP48730 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSNK1DP48730 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CSNK1DP48730 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.69□□□□□ -0.06
CSNK1DP48730 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSNK1DP48730 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSNK1DP48730 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSNK1DP48730 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.69□□□□□ -0.06
CSNK1DP48730 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CSNK1DP48730 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSNK1DP48730 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSNK1DP48730 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.68□□□□□ -0.06
CSNK1DP48730 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSNK1DP48730 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSNK1DP48730 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSNK1DP48730 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CSNK1DP48730 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSNK1DP48730 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSNK1DP48730 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.68□□□□□ -0.06
CSNK1DP48730 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSNK1DP48730 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSNK1DP48730 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CSNK1DP48730 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSNK1DP48730 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
CSNK1DP48730 RN7SKP214-201ENST00000364208 315 ntBASIC14.68□□□□□ -0.06
CSNK1DP48730 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CSNK1DP48730 AC011742.3-201ENST00000439053 820 ntBASIC14.68□□□□□ -0.06
CSNK1DP48730 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.68□□□□□ -0.06
CSNK1DP48730 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC14.68□□□□□ -0.06
CSNK1DP48730 AC099548.2-209ENST00000480264 625 ntBASIC14.68□□□□□ -0.06
CSNK1DP48730 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CSNK1DP48730 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CSNK1DP48730 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC14.68□□□□□ -0.06
CSNK1DP48730 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC14.68□□□□□ -0.06
CSNK1DP48730 GPR182-203ENST00000622922 591 ntBASIC14.68□□□□□ -0.06
CSNK1DP48730 DDX5-235ENST00000630471 473 ntTSL 4 BASIC14.68□□□□□ -0.06
CSNK1DP48730 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC14.68□□□□□ -0.06
CSNK1DP48730 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CSNK1DP48730 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CSNK1DP48730 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CSNK1DP48730 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC14.68□□□□□ -0.06
CSNK1DP48730 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.68□□□□□ -0.06
CSNK1DP48730 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
CSNK1DP48730 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSNK1DP48730 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CSNK1DP48730 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSNK1DP48730 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSNK1DP48730 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CSNK1DP48730 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSNK1DP48730 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CSNK1DP48730 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSNK1DP48730 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CSNK1DP48730 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms