Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
KRT6CP48668 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.38□□□□□ -0.11
KRT6CP48668 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
KRT6CP48668 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.38□□□□□ -0.11
KRT6CP48668 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.38□□□□□ -0.11
KRT6CP48668 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
KRT6CP48668 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
KRT6CP48668 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KRT6CP48668 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
KRT6CP48668 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KRT6CP48668 AL138725.1-201ENST00000407347 1314 ntBASIC14.38□□□□□ -0.11
KRT6CP48668 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
KRT6CP48668 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KRT6CP48668 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KRT6CP48668 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC14.38□□□□□ -0.11
KRT6CP48668 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KRT6CP48668 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
KRT6CP48668 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.37□□□□□ -0.11
KRT6CP48668 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
KRT6CP48668 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
KRT6CP48668 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
KRT6CP48668 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
KRT6CP48668 AC041040.2-201ENST00000622926 2899 ntBASIC14.37□□□□□ -0.11
KRT6CP48668 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
KRT6CP48668 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KRT6CP48668 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14.37□□□□□ -0.11
KRT6CP48668 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KRT6CP48668 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
KRT6CP48668 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KRT6CP48668 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
KRT6CP48668 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.37□□□□□ -0.11
KRT6CP48668 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
KRT6CP48668 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC14.37□□□□□ -0.11
KRT6CP48668 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KRT6CP48668 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KRT6CP48668 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
KRT6CP48668 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
KRT6CP48668 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KRT6CP48668 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
KRT6CP48668 AC131206.1-201ENST00000538078 1211 ntBASIC14.37□□□□□ -0.11
KRT6CP48668 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.37□□□□□ -0.11
KRT6CP48668 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.37□□□□□ -0.11
KRT6CP48668 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.37□□□□□ -0.11
KRT6CP48668 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.37□□□□□ -0.11
KRT6CP48668 AL096865.1-201ENST00000606796 927 ntBASIC14.37□□□□□ -0.11
KRT6CP48668 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.37□□□□□ -0.11
KRT6CP48668 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KRT6CP48668 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KRT6CP48668 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.37□□□□□ -0.11
KRT6CP48668 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KRT6CP48668 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
KRT6CP48668 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.37□□□□□ -0.11
KRT6CP48668 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.37□□□□□ -0.11
KRT6CP48668 PEG13-201ENST00000631594 5667 ntBASIC14.37□□□□□ -0.11
KRT6CP48668 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC14.37□□□□□ -0.11
KRT6CP48668 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.37□□□□□ -0.11
KRT6CP48668 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
KRT6CP48668 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
KRT6CP48668 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KRT6CP48668 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
KRT6CP48668 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
KRT6CP48668 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KRT6CP48668 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
KRT6CP48668 AC131212.3-201ENST00000624087 4219 ntBASIC14.36□□□□□ -0.11
KRT6CP48668 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KRT6CP48668 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
KRT6CP48668 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.36□□□□□ -0.11
KRT6CP48668 MYADML-201ENST00000474610 2147 ntBASIC14.36□□□□□ -0.11
KRT6CP48668 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
KRT6CP48668 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
KRT6CP48668 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
KRT6CP48668 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
KRT6CP48668 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.36□□□□□ -0.11
KRT6CP48668 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
KRT6CP48668 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
KRT6CP48668 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.36□□□□□ -0.11
KRT6CP48668 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
KRT6CP48668 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
KRT6CP48668 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KRT6CP48668 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
KRT6CP48668 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KRT6CP48668 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.36□□□□□ -0.11
KRT6CP48668 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KRT6CP48668 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KRT6CP48668 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KRT6CP48668 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
KRT6CP48668 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
KRT6CP48668 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
KRT6CP48668 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.36□□□□□ -0.11
KRT6CP48668 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
KRT6CP48668 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
KRT6CP48668 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.36□□□□□ -0.11
KRT6CP48668 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.36□□□□□ -0.11
KRT6CP48668 RN7SL204P-201ENST00000582831 262 ntBASIC14.36□□□□□ -0.11
KRT6CP48668 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
KRT6CP48668 AL033527.5-201ENST00000641382 801 ntBASIC14.36□□□□□ -0.11
KRT6CP48668 AL731571.1-201ENST00000617058 5428 ntBASIC14.36□□□□□ -0.11
KRT6CP48668 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
KRT6CP48668 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KRT6CP48668 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms