Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CBX5P45973 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CBX5P45973 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CBX5P45973 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CBX5P45973 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC12.81□□□□□ -0.36
CBX5P45973 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
CBX5P45973 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
CBX5P45973 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CBX5P45973 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CBX5P45973 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CBX5P45973 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CBX5P45973 CD81-202ENST00000381036 880 ntTSL 3 BASIC12.81□□□□□ -0.36
CBX5P45973 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.81□□□□□ -0.36
CBX5P45973 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CBX5P45973 MCCD1P2-201ENST00000423228 335 ntBASIC12.81□□□□□ -0.36
CBX5P45973 KRT18P32-201ENST00000424695 1287 ntBASIC12.81□□□□□ -0.36
CBX5P45973 RPP21-221ENST00000428040 594 ntTSL 2 BASIC12.81□□□□□ -0.36
CBX5P45973 KRT18P64-201ENST00000434946 1219 ntBASIC12.81□□□□□ -0.36
CBX5P45973 RPL13P2-201ENST00000440687 659 ntBASIC12.81□□□□□ -0.36
CBX5P45973 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CBX5P45973 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC12.81□□□□□ -0.36
CBX5P45973 PP7080-204ENST00000510714 601 ntTSL 3 BASIC12.81□□□□□ -0.36
CBX5P45973 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC12.81□□□□□ -0.36
CBX5P45973 GATD1-206ENST00000526325 756 ntTSL 5 BASIC12.81□□□□□ -0.36
CBX5P45973 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC12.81□□□□□ -0.36
CBX5P45973 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC12.81□□□□□ -0.36
CBX5P45973 AL079307.3-201ENST00000556114 283 ntBASIC12.81□□□□□ -0.36
CBX5P45973 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CBX5P45973 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC12.81□□□□□ -0.36
CBX5P45973 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC12.81□□□□□ -0.36
CBX5P45973 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC12.81□□□□□ -0.36
CBX5P45973 C20orf181-201ENST00000623918 480 ntBASIC12.81□□□□□ -0.36
CBX5P45973 LINC00628-201ENST00000628516 1289 ntBASIC12.81□□□□□ -0.36
CBX5P45973 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CBX5P45973 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
CBX5P45973 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
CBX5P45973 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CBX5P45973 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CBX5P45973 SPATA13-203ENST00000382108 8463 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CBX5P45973 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC12.81□□□□□ -0.36
CBX5P45973 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CBX5P45973 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.81□□□□□ -0.36
CBX5P45973 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CBX5P45973 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC12.81□□□□□ -0.36
CBX5P45973 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CBX5P45973 C5AR2-201ENST00000595464 6746 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CBX5P45973 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CBX5P45973 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CBX5P45973 GLI3-201ENST00000395925 8208 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CBX5P45973 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CBX5P45973 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CBX5P45973 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CBX5P45973 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
CBX5P45973 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CBX5P45973 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
CBX5P45973 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
CBX5P45973 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CBX5P45973 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC12.8□□□□□ -0.36
CBX5P45973 TP73-209ENST00000603362 1668 ntTSL 5 BASIC12.8□□□□□ -0.36
CBX5P45973 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CBX5P45973 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CBX5P45973 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CBX5P45973 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CBX5P45973 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC12.8□□□□□ -0.36
CBX5P45973 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CBX5P45973 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CBX5P45973 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CBX5P45973 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CBX5P45973 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CBX5P45973 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CBX5P45973 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CBX5P45973 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC12.8□□□□□ -0.36
CBX5P45973 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CBX5P45973 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CBX5P45973 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CBX5P45973 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CBX5P45973 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
CBX5P45973 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC12.8□□□□□ -0.36
CBX5P45973 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC12.8□□□□□ -0.36
CBX5P45973 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC12.8□□□□□ -0.36
CBX5P45973 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC12.8□□□□□ -0.36
CBX5P45973 AC025048.3-201ENST00000590609 569 ntBASIC12.8□□□□□ -0.36
CBX5P45973 AC005702.4-201ENST00000618393 416 ntBASIC12.8□□□□□ -0.36
CBX5P45973 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC12.8□□□□□ -0.36
CBX5P45973 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CBX5P45973 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
CBX5P45973 CLCNKB-202ENST00000375679 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CBX5P45973 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CBX5P45973 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CBX5P45973 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CBX5P45973 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CBX5P45973 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CBX5P45973 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC12.8□□□□□ -0.36
CBX5P45973 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC12.8□□□□□ -0.36
CBX5P45973 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CBX5P45973 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CBX5P45973 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CBX5P45973 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CBX5P45973 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
CBX5P45973 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms