Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC18.26■□□□□ 0.51
RFC4P35249 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC18.26■□□□□ 0.51
RFC4P35249 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFC4P35249 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFC4P35249 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFC4P35249 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFC4P35249 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFC4P35249 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFC4P35249 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
RFC4P35249 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFC4P35249 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RFC4P35249 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC18.25■□□□□ 0.51
RFC4P35249 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
RFC4P35249 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFC4P35249 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFC4P35249 KHSRPP1-201ENST00000427983 1768 ntBASIC18.25■□□□□ 0.51
RFC4P35249 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RFC4P35249 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFC4P35249 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RFC4P35249 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFC4P35249 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFC4P35249 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
RFC4P35249 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
RFC4P35249 AL135901.1-201ENST00000451812 333 ntBASIC18.25■□□□□ 0.51
RFC4P35249 RN7SL494P-201ENST00000461517 304 ntBASIC18.25■□□□□ 0.51
RFC4P35249 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RFC4P35249 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC18.25■□□□□ 0.51
RFC4P35249 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RFC4P35249 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC18.25■□□□□ 0.51
RFC4P35249 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC18.25■□□□□ 0.51
RFC4P35249 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC18.25■□□□□ 0.51
RFC4P35249 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC18.25■□□□□ 0.51
RFC4P35249 AC148477.9-201ENST00000623974 539 ntBASIC18.25■□□□□ 0.51
RFC4P35249 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC18.25■□□□□ 0.51
RFC4P35249 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
RFC4P35249 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFC4P35249 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFC4P35249 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
RFC4P35249 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFC4P35249 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RFC4P35249 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RFC4P35249 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RFC4P35249 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFC4P35249 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC18.25■□□□□ 0.51
RFC4P35249 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RFC4P35249 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC18.25■□□□□ 0.51
RFC4P35249 AC025183.3-201ENST00000623526 1482 ntBASIC18.25■□□□□ 0.51
RFC4P35249 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFC4P35249 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RFC4P35249 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFC4P35249 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC18.25■□□□□ 0.51
RFC4P35249 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
RFC4P35249 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFC4P35249 AC136621.1-201ENST00000624017 2304 ntBASIC18.24■□□□□ 0.51
RFC4P35249 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFC4P35249 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
RFC4P35249 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RFC4P35249 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC18.24■□□□□ 0.51
RFC4P35249 AGGF1P1-201ENST00000509500 2073 ntBASIC18.24■□□□□ 0.51
RFC4P35249 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFC4P35249 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RFC4P35249 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFC4P35249 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC18.24■□□□□ 0.51
RFC4P35249 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC18.24■□□□□ 0.51
RFC4P35249 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
RFC4P35249 COX20P1-201ENST00000366529 357 ntBASIC18.24■□□□□ 0.51
RFC4P35249 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC18.24■□□□□ 0.51
RFC4P35249 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC18.24■□□□□ 0.51
RFC4P35249 GNG10P1-201ENST00000452289 199 ntBASIC18.24■□□□□ 0.51
RFC4P35249 SCARNA12-201ENST00000459155 270 ntBASIC18.24■□□□□ 0.51
RFC4P35249 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
RFC4P35249 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC18.24■□□□□ 0.51
RFC4P35249 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC18.24■□□□□ 0.51
RFC4P35249 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
RFC4P35249 AC090386.2-201ENST00000623010 1039 ntBASIC18.24■□□□□ 0.51
RFC4P35249 ST5-261ENST00000626808 1071 ntTSL 5 BASIC18.24■□□□□ 0.51
RFC4P35249 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.24■□□□□ 0.51
RFC4P35249 NFIC-211ENST00000641145 8399 ntBASIC18.24■□□□□ 0.51
RFC4P35249 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFC4P35249 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
RFC4P35249 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFC4P35249 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC18.24■□□□□ 0.51
RFC4P35249 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
RFC4P35249 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFC4P35249 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
RFC4P35249 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC18.24■□□□□ 0.51
RFC4P35249 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC18.24■□□□□ 0.51
RFC4P35249 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFC4P35249 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFC4P35249 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFC4P35249 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RFC4P35249 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC18.23■□□□□ 0.51
RFC4P35249 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
RFC4P35249 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFC4P35249 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RFC4P35249 GSN-206ENST00000394353 2311 ntTSL 2 BASIC18.23■□□□□ 0.51
RFC4P35249 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFC4P35249 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFC4P35249 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RFC4P35249 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms