Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHMP24386 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.87□□□□□ -0.19
CHMP24386 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHMP24386 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.87□□□□□ -0.19
CHMP24386 AP001889.1-201ENST00000525414 633 ntBASIC13.87□□□□□ -0.19
CHMP24386 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.87□□□□□ -0.19
CHMP24386 SAMD11P1-201ENST00000571429 661 ntBASIC13.87□□□□□ -0.19
CHMP24386 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC13.87□□□□□ -0.19
CHMP24386 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.87□□□□□ -0.19
CHMP24386 PRSS30P-206ENST00000641773 873 ntBASIC13.87□□□□□ -0.19
CHMP24386 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CHMP24386 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHMP24386 AC087386.2-201ENST00000623212 4637 ntBASIC13.87□□□□□ -0.19
CHMP24386 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.87□□□□□ -0.19
CHMP24386 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHMP24386 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHMP24386 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHMP24386 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHMP24386 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.87□□□□□ -0.19
CHMP24386 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CHMP24386 AL354702.1-201ENST00000442006 1960 ntBASIC13.87□□□□□ -0.19
CHMP24386 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHMP24386 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHMP24386 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
CHMP24386 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHMP24386 AL360270.3-201ENST00000609118 1348 ntBASIC13.87□□□□□ -0.19
CHMP24386 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CHMP24386 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CHMP24386 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHMP24386 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
CHMP24386 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.87□□□□□ -0.19
CHMP24386 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHMP24386 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CHMP24386 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHMP24386 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CHMP24386 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CHMP24386 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
CHMP24386 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHMP24386 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHMP24386 AC018665.1-201ENST00000622927 1362 ntBASIC13.86□□□□□ -0.19
CHMP24386 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CHMP24386 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CHMP24386 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CHMP24386 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CHMP24386 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CHMP24386 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHMP24386 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHMP24386 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHMP24386 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHMP24386 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CHMP24386 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CHMP24386 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHMP24386 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHMP24386 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHMP24386 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHMP24386 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHMP24386 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.86□□□□□ -0.19
CHMP24386 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CHMP24386 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.86□□□□□ -0.19
CHMP24386 AC112492.5-201ENST00000421897 457 ntBASIC13.86□□□□□ -0.19
CHMP24386 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.86□□□□□ -0.19
CHMP24386 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.86□□□□□ -0.19
CHMP24386 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
CHMP24386 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.86□□□□□ -0.19
CHMP24386 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC13.86□□□□□ -0.19
CHMP24386 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CHMP24386 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CHMP24386 AC022447.6-201ENST00000515522 438 ntBASIC13.86□□□□□ -0.19
CHMP24386 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
CHMP24386 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.86□□□□□ -0.19
CHMP24386 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.86□□□□□ -0.19
CHMP24386 AP005482.1-201ENST00000563722 1273 ntBASIC13.86□□□□□ -0.19
CHMP24386 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.86□□□□□ -0.19
CHMP24386 IFT20-216ENST00000588477 774 ntTSL 5 BASIC13.86□□□□□ -0.19
CHMP24386 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
CHMP24386 AL008721.1-201ENST00000609964 604 ntBASIC13.86□□□□□ -0.19
CHMP24386 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CHMP24386 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CHMP24386 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHMP24386 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHMP24386 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
CHMP24386 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CHMP24386 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.86□□□□□ -0.19
CHMP24386 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CHMP24386 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHMP24386 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.86□□□□□ -0.19
CHMP24386 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CHMP24386 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CHMP24386 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHMP24386 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
CHMP24386 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHMP24386 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHMP24386 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHMP24386 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHMP24386 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.86□□□□□ -0.19
CHMP24386 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CHMP24386 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.86□□□□□ -0.19
CHMP24386 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.86□□□□□ -0.19
CHMP24386 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CHMP24386 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms