Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KCNA3P22001 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KCNA3P22001 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
KCNA3P22001 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KCNA3P22001 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KCNA3P22001 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KCNA3P22001 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.69■□□□□ 0.42
KCNA3P22001 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.69■□□□□ 0.42
KCNA3P22001 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
KCNA3P22001 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
KCNA3P22001 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
KCNA3P22001 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC17.68■□□□□ 0.42
KCNA3P22001 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC17.68■□□□□ 0.42
KCNA3P22001 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC17.68■□□□□ 0.42
KCNA3P22001 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KCNA3P22001 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
KCNA3P22001 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
KCNA3P22001 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KCNA3P22001 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KCNA3P22001 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KCNA3P22001 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
KCNA3P22001 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
KCNA3P22001 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KCNA3P22001 GEMIN8P4-201ENST00000380526 729 ntBASIC17.68■□□□□ 0.42
KCNA3P22001 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
KCNA3P22001 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
KCNA3P22001 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.68■□□□□ 0.42
KCNA3P22001 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC17.68■□□□□ 0.42
KCNA3P22001 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC17.68■□□□□ 0.42
KCNA3P22001 PSAT1P2-201ENST00000426107 972 ntBASIC17.68■□□□□ 0.42
KCNA3P22001 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC17.68■□□□□ 0.42
KCNA3P22001 ASS1P2-201ENST00000439895 1223 ntBASIC17.68■□□□□ 0.42
KCNA3P22001 GALP-202ENST00000440823 889 ntTSL 5 BASIC17.68■□□□□ 0.42
KCNA3P22001 GRPEL2P1-201ENST00000453145 339 ntBASIC17.68■□□□□ 0.42
KCNA3P22001 CHCHD2P2-201ENST00000503744 321 ntBASIC17.68■□□□□ 0.42
KCNA3P22001 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.68■□□□□ 0.42
KCNA3P22001 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KCNA3P22001 AC140658.4-201ENST00000561990 352 ntBASIC17.68■□□□□ 0.42
KCNA3P22001 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC17.68■□□□□ 0.42
KCNA3P22001 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
KCNA3P22001 AC011462.4-201ENST00000616866 449 ntBASIC17.68■□□□□ 0.42
KCNA3P22001 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC17.68■□□□□ 0.42
KCNA3P22001 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
KCNA3P22001 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KCNA3P22001 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KCNA3P22001 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
KCNA3P22001 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
KCNA3P22001 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC17.68■□□□□ 0.42
KCNA3P22001 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC17.68■□□□□ 0.42
KCNA3P22001 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KCNA3P22001 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
KCNA3P22001 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
KCNA3P22001 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
KCNA3P22001 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KCNA3P22001 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KCNA3P22001 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KCNA3P22001 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
KCNA3P22001 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC17.67■□□□□ 0.42
KCNA3P22001 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
KCNA3P22001 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
KCNA3P22001 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KCNA3P22001 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
KCNA3P22001 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KCNA3P22001 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
KCNA3P22001 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC17.67■□□□□ 0.42
KCNA3P22001 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
KCNA3P22001 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
KCNA3P22001 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC17.67■□□□□ 0.42
KCNA3P22001 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KCNA3P22001 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KCNA3P22001 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
KCNA3P22001 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KCNA3P22001 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KCNA3P22001 AP000354.1-201ENST00000396982 456 ntBASIC17.67■□□□□ 0.42
KCNA3P22001 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC17.67■□□□□ 0.42
KCNA3P22001 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC17.67■□□□□ 0.42
KCNA3P22001 SEPHS2P1-201ENST00000511618 1162 ntBASIC17.67■□□□□ 0.42
KCNA3P22001 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC17.67■□□□□ 0.42
KCNA3P22001 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC17.67■□□□□ 0.42
KCNA3P22001 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
KCNA3P22001 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC17.67■□□□□ 0.42
KCNA3P22001 AL132994.1-201ENST00000554098 400 ntBASIC17.67■□□□□ 0.42
KCNA3P22001 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC17.67■□□□□ 0.42
KCNA3P22001 MED11-202ENST00000573708 802 ntTSL 2 BASIC17.67■□□□□ 0.42
KCNA3P22001 SKA2-205ENST00000580541 689 ntTSL 3 BASIC17.67■□□□□ 0.42
KCNA3P22001 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC17.67■□□□□ 0.42
KCNA3P22001 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC17.67■□□□□ 0.42
KCNA3P22001 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC17.67■□□□□ 0.42
KCNA3P22001 AL009176.1-201ENST00000607876 650 ntBASIC17.67■□□□□ 0.42
KCNA3P22001 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC17.67■□□□□ 0.42
KCNA3P22001 RARS-210ENST00000626454 177 ntTSL 5 BASIC17.67■□□□□ 0.42
KCNA3P22001 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KCNA3P22001 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC17.67■□□□□ 0.42
KCNA3P22001 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
KCNA3P22001 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC17.67■□□□□ 0.42
KCNA3P22001 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KCNA3P22001 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
KCNA3P22001 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
KCNA3P22001 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KCNA3P22001 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms