Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
NCK1P16333 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
NCK1P16333 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14□□□□□ -0.17
NCK1P16333 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
NCK1P16333 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
NCK1P16333 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC14□□□□□ -0.17
NCK1P16333 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14□□□□□ -0.17
NCK1P16333 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NCK1P16333 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NCK1P16333 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC13.99□□□□□ -0.17
NCK1P16333 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
NCK1P16333 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NCK1P16333 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NCK1P16333 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NCK1P16333 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13.99□□□□□ -0.17
NCK1P16333 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
NCK1P16333 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.99□□□□□ -0.17
NCK1P16333 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NCK1P16333 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
NCK1P16333 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NCK1P16333 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC13.99□□□□□ -0.17
NCK1P16333 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
NCK1P16333 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NCK1P16333 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.99□□□□□ -0.17
NCK1P16333 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NCK1P16333 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NCK1P16333 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NCK1P16333 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NCK1P16333 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.99□□□□□ -0.17
NCK1P16333 AL645937.2-201ENST00000396808 931 ntBASIC13.99□□□□□ -0.17
NCK1P16333 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC13.99□□□□□ -0.17
NCK1P16333 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.99□□□□□ -0.17
NCK1P16333 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC13.99□□□□□ -0.17
NCK1P16333 AC026434.2-201ENST00000506094 1078 ntBASIC13.99□□□□□ -0.17
NCK1P16333 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
NCK1P16333 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC13.99□□□□□ -0.17
NCK1P16333 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC13.99□□□□□ -0.17
NCK1P16333 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.99□□□□□ -0.17
NCK1P16333 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC13.99□□□□□ -0.17
NCK1P16333 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NCK1P16333 DAD1-205ENST00000543337 501 ntTSL 3 BASIC13.99□□□□□ -0.17
NCK1P16333 VPS29-207ENST00000549970 818 ntTSL 3 BASIC13.99□□□□□ -0.17
NCK1P16333 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13.99□□□□□ -0.17
NCK1P16333 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC13.99□□□□□ -0.17
NCK1P16333 METTL23-205ENST00000588302 925 ntTSL 5 BASIC13.99□□□□□ -0.17
NCK1P16333 AL391069.4-201ENST00000609583 481 ntBASIC13.99□□□□□ -0.17
NCK1P16333 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NCK1P16333 AC015688.4-201ENST00000580780 1647 ntBASIC13.99□□□□□ -0.17
NCK1P16333 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
NCK1P16333 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NCK1P16333 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
NCK1P16333 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NCK1P16333 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NCK1P16333 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NCK1P16333 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NCK1P16333 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
NCK1P16333 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NCK1P16333 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
NCK1P16333 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NCK1P16333 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC13.98□□□□□ -0.17
NCK1P16333 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
NCK1P16333 TSN-212ENST00000536142 3328 ntTSL 2 BASIC13.98□□□□□ -0.17
NCK1P16333 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
NCK1P16333 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NCK1P16333 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NCK1P16333 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NCK1P16333 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.98□□□□□ -0.17
NCK1P16333 AL031595.1-201ENST00000623969 4709 ntBASIC13.98□□□□□ -0.17
NCK1P16333 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.98□□□□□ -0.17
NCK1P16333 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC13.98□□□□□ -0.17
NCK1P16333 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.98□□□□□ -0.17
NCK1P16333 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NCK1P16333 AC087499.5-201ENST00000452760 1342 ntBASIC13.98□□□□□ -0.17
NCK1P16333 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NCK1P16333 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.98□□□□□ -0.17
NCK1P16333 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NCK1P16333 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NCK1P16333 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NCK1P16333 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NCK1P16333 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NCK1P16333 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
NCK1P16333 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NCK1P16333 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
NCK1P16333 MEIS3P1-201ENST00000495167 958 ntBASIC13.98□□□□□ -0.17
NCK1P16333 AC026410.3-201ENST00000514280 936 ntBASIC13.98□□□□□ -0.17
NCK1P16333 AC109322.1-201ENST00000524499 1264 ntBASIC13.98□□□□□ -0.17
NCK1P16333 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.98□□□□□ -0.17
NCK1P16333 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC13.98□□□□□ -0.17
NCK1P16333 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.98□□□□□ -0.17
NCK1P16333 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.98□□□□□ -0.17
NCK1P16333 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC13.98□□□□□ -0.17
NCK1P16333 AC092364.2-202ENST00000597012 1073 ntBASIC13.98□□□□□ -0.17
NCK1P16333 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NCK1P16333 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
NCK1P16333 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
NCK1P16333 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC13.98□□□□□ -0.17
NCK1P16333 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NCK1P16333 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NCK1P16333 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NCK1P16333 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms