Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.26■□□□□ 0.03
BRAFP15056 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.26■□□□□ 0.03
BRAFP15056 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.26■□□□□ 0.03
BRAFP15056 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
BRAFP15056 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
BRAFP15056 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
BRAFP15056 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
BRAFP15056 KRT8P22-201ENST00000562317 1415 ntBASIC15.26■□□□□ 0.03
BRAFP15056 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
BRAFP15056 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
BRAFP15056 GALC-206ENST00000544807 2528 ntTSL 2 BASIC15.25■□□□□ 0.03
BRAFP15056 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
BRAFP15056 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
BRAFP15056 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
BRAFP15056 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
BRAFP15056 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
BRAFP15056 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
BRAFP15056 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
BRAFP15056 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.25■□□□□ 0.03
BRAFP15056 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.25■□□□□ 0.03
BRAFP15056 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
BRAFP15056 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
BRAFP15056 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.25■□□□□ 0.03
BRAFP15056 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
BRAFP15056 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.25■□□□□ 0.03
BRAFP15056 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
BRAFP15056 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
BRAFP15056 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.25■□□□□ 0.03
BRAFP15056 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
BRAFP15056 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
BRAFP15056 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
BRAFP15056 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.25■□□□□ 0.03
BRAFP15056 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
BRAFP15056 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.25■□□□□ 0.03
BRAFP15056 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.25■□□□□ 0.03
BRAFP15056 AL442647.2-201ENST00000429864 857 ntBASIC15.25■□□□□ 0.03
BRAFP15056 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.25■□□□□ 0.03
BRAFP15056 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.25■□□□□ 0.03
BRAFP15056 RN7SL837P-201ENST00000463010 287 ntBASIC15.25■□□□□ 0.03
BRAFP15056 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.25■□□□□ 0.03
BRAFP15056 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
BRAFP15056 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.25■□□□□ 0.03
BRAFP15056 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
BRAFP15056 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.25■□□□□ 0.03
BRAFP15056 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
BRAFP15056 COL6A4P2-202ENST00000504443 2753 ntBASIC15.25■□□□□ 0.03
BRAFP15056 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC15.25■□□□□ 0.03
BRAFP15056 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
BRAFP15056 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC15.25■□□□□ 0.03
BRAFP15056 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
BRAFP15056 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
BRAFP15056 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
BRAFP15056 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
BRAFP15056 AC099521.3-201ENST00000624251 2938 ntBASIC15.25■□□□□ 0.03
BRAFP15056 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.25■□□□□ 0.03
BRAFP15056 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.25■□□□□ 0.03
BRAFP15056 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
BRAFP15056 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
BRAFP15056 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC15.25■□□□□ 0.03
BRAFP15056 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
BRAFP15056 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
BRAFP15056 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC15.25■□□□□ 0.03
BRAFP15056 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC15.25■□□□□ 0.03
BRAFP15056 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
BRAFP15056 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC15.25■□□□□ 0.03
BRAFP15056 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.24■□□□□ 0.03
BRAFP15056 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.24■□□□□ 0.03
BRAFP15056 AGGF1P1-201ENST00000509500 2073 ntBASIC15.24■□□□□ 0.03
BRAFP15056 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC15.24■□□□□ 0.03
BRAFP15056 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC15.24■□□□□ 0.03
BRAFP15056 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
BRAFP15056 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
BRAFP15056 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
BRAFP15056 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
BRAFP15056 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.24■□□□□ 0.03
BRAFP15056 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
BRAFP15056 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
BRAFP15056 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
BRAFP15056 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
BRAFP15056 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
BRAFP15056 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
BRAFP15056 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.24■□□□□ 0.03
BRAFP15056 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC15.24■□□□□ 0.03
BRAFP15056 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
BRAFP15056 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
BRAFP15056 PPT1-213ENST00000641319 2388 ntBASIC15.24■□□□□ 0.03
BRAFP15056 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
BRAFP15056 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
BRAFP15056 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
BRAFP15056 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
BRAFP15056 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
BRAFP15056 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
BRAFP15056 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
BRAFP15056 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.24■□□□□ 0.03
BRAFP15056 AL512384.1-201ENST00000406683 331 ntBASIC15.24■□□□□ 0.03
BRAFP15056 WBP2-203ENST00000433525 928 ntTSL 2 BASIC15.24■□□□□ 0.03
BRAFP15056 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.24■□□□□ 0.03
BRAFP15056 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.24■□□□□ 0.03
BRAFP15056 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.24■□□□□ 0.03
BRAFP15056 AL359711.2-201ENST00000563105 872 ntBASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms