Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 RN7SL837P-201ENST00000463010 287 ntBASIC13.61□□□□□ -0.23
THBS1P07996 HMGB3P14-201ENST00000494195 599 ntBASIC13.61□□□□□ -0.23
THBS1P07996 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.61□□□□□ -0.23
THBS1P07996 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC13.61□□□□□ -0.23
THBS1P07996 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
THBS1P07996 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.61□□□□□ -0.23
THBS1P07996 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.61□□□□□ -0.23
THBS1P07996 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
THBS1P07996 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
THBS1P07996 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.61□□□□□ -0.23
THBS1P07996 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
THBS1P07996 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.61□□□□□ -0.23
THBS1P07996 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
THBS1P07996 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
THBS1P07996 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
THBS1P07996 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
THBS1P07996 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
THBS1P07996 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
THBS1P07996 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
THBS1P07996 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
THBS1P07996 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.61□□□□□ -0.23
THBS1P07996 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
THBS1P07996 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.61□□□□□ -0.23
THBS1P07996 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
THBS1P07996 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
THBS1P07996 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.6□□□□□ -0.23
THBS1P07996 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
THBS1P07996 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
THBS1P07996 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
THBS1P07996 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
THBS1P07996 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
THBS1P07996 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
THBS1P07996 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
THBS1P07996 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
THBS1P07996 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
THBS1P07996 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
THBS1P07996 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
THBS1P07996 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.6□□□□□ -0.23
THBS1P07996 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.6□□□□□ -0.23
THBS1P07996 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
THBS1P07996 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
THBS1P07996 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
THBS1P07996 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
THBS1P07996 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
THBS1P07996 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
THBS1P07996 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
THBS1P07996 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.6□□□□□ -0.23
THBS1P07996 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.6□□□□□ -0.23
THBS1P07996 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.6□□□□□ -0.23
THBS1P07996 C2orf27AP3-201ENST00000434123 579 ntBASIC13.6□□□□□ -0.23
THBS1P07996 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
THBS1P07996 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
THBS1P07996 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.6□□□□□ -0.23
THBS1P07996 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.6□□□□□ -0.23
THBS1P07996 RNA5SP486-201ENST00000515961 83 ntBASIC13.6□□□□□ -0.23
THBS1P07996 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.6□□□□□ -0.23
THBS1P07996 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
THBS1P07996 SORD2P-201ENST00000558556 1069 ntBASIC13.6□□□□□ -0.23
THBS1P07996 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.6□□□□□ -0.23
THBS1P07996 MIR3908-201ENST00000579798 126 ntBASIC13.6□□□□□ -0.23
THBS1P07996 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
THBS1P07996 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
THBS1P07996 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.6□□□□□ -0.23
THBS1P07996 AL354718.3-201ENST00000616414 581 ntBASIC13.6□□□□□ -0.23
THBS1P07996 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
THBS1P07996 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
THBS1P07996 CR382287.1-201ENST00000623954 586 ntBASIC13.6□□□□□ -0.23
THBS1P07996 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.6□□□□□ -0.23
THBS1P07996 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.6□□□□□ -0.23
THBS1P07996 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
THBS1P07996 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
THBS1P07996 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
THBS1P07996 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
THBS1P07996 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
THBS1P07996 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.6□□□□□ -0.23
THBS1P07996 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
THBS1P07996 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
THBS1P07996 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.6□□□□□ -0.23
THBS1P07996 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
THBS1P07996 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
THBS1P07996 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.6□□□□□ -0.23
THBS1P07996 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
THBS1P07996 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
THBS1P07996 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
THBS1P07996 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
THBS1P07996 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
THBS1P07996 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.59□□□□□ -0.23
THBS1P07996 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
THBS1P07996 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.59□□□□□ -0.23
THBS1P07996 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.59□□□□□ -0.23
THBS1P07996 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
THBS1P07996 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
THBS1P07996 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
THBS1P07996 AC041040.2-201ENST00000622926 2899 ntBASIC13.59□□□□□ -0.23
THBS1P07996 AC011474.4-201ENST00000623523 2076 ntBASIC13.59□□□□□ -0.23
THBS1P07996 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
THBS1P07996 AC104581.4-201ENST00000623126 3052 ntBASIC13.59□□□□□ -0.23
THBS1P07996 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
THBS1P07996 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
THBS1P07996 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms