Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CAPN1P07384 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.61□□□□□ -0.07
CAPN1P07384 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CAPN1P07384 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CAPN1P07384 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.61□□□□□ -0.07
CAPN1P07384 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CAPN1P07384 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CAPN1P07384 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.61□□□□□ -0.07
CAPN1P07384 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CAPN1P07384 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CAPN1P07384 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.6□□□□□ -0.07
CAPN1P07384 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
CAPN1P07384 HSPA7-201ENST00000445535 1927 ntBASIC14.6□□□□□ -0.07
CAPN1P07384 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CAPN1P07384 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
CAPN1P07384 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.6□□□□□ -0.07
CAPN1P07384 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CAPN1P07384 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.6□□□□□ -0.07
CAPN1P07384 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CAPN1P07384 AL354702.1-201ENST00000442006 1960 ntBASIC14.6□□□□□ -0.07
CAPN1P07384 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CAPN1P07384 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CAPN1P07384 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CAPN1P07384 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CAPN1P07384 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CAPN1P07384 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CAPN1P07384 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CAPN1P07384 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CAPN1P07384 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CAPN1P07384 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CAPN1P07384 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.6□□□□□ -0.07
CAPN1P07384 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CAPN1P07384 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CAPN1P07384 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CAPN1P07384 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
CAPN1P07384 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CAPN1P07384 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CAPN1P07384 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.6□□□□□ -0.07
CAPN1P07384 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.6□□□□□ -0.07
CAPN1P07384 FO681548.1-201ENST00000455617 1132 ntBASIC14.6□□□□□ -0.07
CAPN1P07384 TPT1P11-201ENST00000458482 498 ntBASIC14.6□□□□□ -0.07
CAPN1P07384 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC14.6□□□□□ -0.07
CAPN1P07384 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC14.6□□□□□ -0.07
CAPN1P07384 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
CAPN1P07384 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CAPN1P07384 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CAPN1P07384 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.6□□□□□ -0.07
CAPN1P07384 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.6□□□□□ -0.07
CAPN1P07384 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC14.6□□□□□ -0.07
CAPN1P07384 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.6□□□□□ -0.07
CAPN1P07384 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CAPN1P07384 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.6□□□□□ -0.07
CAPN1P07384 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CAPN1P07384 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CAPN1P07384 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
CAPN1P07384 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CAPN1P07384 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CAPN1P07384 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CAPN1P07384 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CAPN1P07384 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CAPN1P07384 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CAPN1P07384 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CAPN1P07384 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CAPN1P07384 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.6□□□□□ -0.07
CAPN1P07384 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CAPN1P07384 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CAPN1P07384 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.59□□□□□ -0.07
CAPN1P07384 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.59□□□□□ -0.07
CAPN1P07384 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.59□□□□□ -0.07
CAPN1P07384 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CAPN1P07384 KRT8P14-201ENST00000414254 1442 ntBASIC14.59□□□□□ -0.07
CAPN1P07384 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CAPN1P07384 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.59□□□□□ -0.07
CAPN1P07384 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CAPN1P07384 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
CAPN1P07384 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CAPN1P07384 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CAPN1P07384 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CAPN1P07384 MPV17-206ENST00000402722 827 ntTSL 3 BASIC14.59□□□□□ -0.07
CAPN1P07384 AL139094.1-201ENST00000405549 1188 ntBASIC14.59□□□□□ -0.07
CAPN1P07384 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.59□□□□□ -0.07
CAPN1P07384 AC016694.1-201ENST00000434179 700 ntBASIC14.59□□□□□ -0.07
CAPN1P07384 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC14.59□□□□□ -0.07
CAPN1P07384 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CAPN1P07384 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC14.59□□□□□ -0.07
CAPN1P07384 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.59□□□□□ -0.07
CAPN1P07384 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.59□□□□□ -0.07
CAPN1P07384 AP001582.1-201ENST00000525856 295 ntBASIC14.59□□□□□ -0.07
CAPN1P07384 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC14.59□□□□□ -0.07
CAPN1P07384 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC14.59□□□□□ -0.07
CAPN1P07384 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC14.59□□□□□ -0.07
CAPN1P07384 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.59□□□□□ -0.07
CAPN1P07384 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.59□□□□□ -0.07
CAPN1P07384 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC14.59□□□□□ -0.07
CAPN1P07384 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC14.59□□□□□ -0.07
CAPN1P07384 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CAPN1P07384 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CAPN1P07384 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.59□□□□□ -0.07
CAPN1P07384 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.59□□□□□ -0.07
CAPN1P07384 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms