Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC11.81□□□□□ -0.52
APOC3P02656 ALOXE3-201ENST00000318227 3053 ntTSL 2 BASIC11.81□□□□□ -0.52
APOC3P02656 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
APOC3P02656 TMEM86A-201ENST00000280734 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
APOC3P02656 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
APOC3P02656 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
APOC3P02656 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
APOC3P02656 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
APOC3P02656 TXNRD1-202ENST00000388854 4277 ntTSL 5 BASIC11.81□□□□□ -0.52
APOC3P02656 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC11.81□□□□□ -0.52
APOC3P02656 FLJ30679-201ENST00000624773 1980 ntBASIC11.81□□□□□ -0.52
APOC3P02656 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
APOC3P02656 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
APOC3P02656 KLK2-202ENST00000358049 2847 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
APOC3P02656 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
APOC3P02656 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC11.81□□□□□ -0.52
APOC3P02656 LMCD1-201ENST00000157600 8405 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
APOC3P02656 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
APOC3P02656 SFPQ-201ENST00000357214 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
APOC3P02656 FER1L5-207ENST00000641731 6294 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
APOC3P02656 TEX35-203ENST00000367641 2377 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
APOC3P02656 PES1-205ENST00000405677 2708 ntTSL 2 BASIC11.8□□□□□ -0.52
APOC3P02656 AGAP3-205ENST00000463381 2730 ntTSL 2 BASIC11.8□□□□□ -0.52
APOC3P02656 PAM-204ENST00000348126 3622 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
APOC3P02656 POTEI-203ENST00000631234 2072 ntTSL 2 BASIC11.8□□□□□ -0.52
APOC3P02656 CACNA1F-203ENST00000376265 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOC3P02656 ST5-201ENST00000313726 4507 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOC3P02656 ZNF341-201ENST00000342427 3661 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOC3P02656 PPP4R3B-206ENST00000616407 4385 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
APOC3P02656 AC023355.1-202ENST00000612262 4242 ntTSL 5 BASIC11.8□□□□□ -0.52
APOC3P02656 HPSE2-202ENST00000370549 2121 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
APOC3P02656 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
APOC3P02656 FBXW8-202ENST00000455858 4648 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
APOC3P02656 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOC3P02656 PHF21B-203ENST00000403565 3586 ntTSL 2 BASIC11.8□□□□□ -0.52
APOC3P02656 SGSM1-201ENST00000400358 6643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOC3P02656 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOC3P02656 IPO7-201ENST00000379719 6191 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOC3P02656 LAIR1-204ENST00000391743 2735 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
APOC3P02656 PTPRN2-203ENST00000389418 4706 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOC3P02656 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOC3P02656 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOC3P02656 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
APOC3P02656 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
APOC3P02656 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC11.8□□□□□ -0.52
APOC3P02656 RNA5SP413-201ENST00000516373 109 ntBASIC11.8□□□□□ -0.52
APOC3P02656 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC11.8□□□□□ -0.52
APOC3P02656 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC11.8□□□□□ -0.52
APOC3P02656 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
APOC3P02656 FARP1-201ENST00000319562 10262 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOC3P02656 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC11.8□□□□□ -0.52
APOC3P02656 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
APOC3P02656 CYP2D8P-201ENST00000433633 1490 ntBASIC11.8□□□□□ -0.52
APOC3P02656 TJAP1-202ENST00000372444 2778 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
APOC3P02656 TJAP1-203ENST00000372445 2751 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
APOC3P02656 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC11.8□□□□□ -0.52
APOC3P02656 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOC3P02656 MESD-201ENST00000261758 4264 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOC3P02656 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOC3P02656 SLC44A3-AS1-215ENST00000634870 5956 ntTSL 5 BASIC11.8□□□□□ -0.52
APOC3P02656 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC11.8□□□□□ -0.52
APOC3P02656 ITPRIP-203ENST00000358187 3981 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
APOC3P02656 SHROOM3-201ENST00000296043 11020 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOC3P02656 AC011840.2-201ENST00000563063 1520 ntBASIC11.8□□□□□ -0.52
APOC3P02656 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC11.8□□□□□ -0.52
APOC3P02656 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC11.8□□□□□ -0.52
APOC3P02656 ZIC3-201ENST00000287538 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOC3P02656 RPL13-201ENST00000311528 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOC3P02656 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
APOC3P02656 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC11.79□□□□□ -0.52
APOC3P02656 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
APOC3P02656 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC11.79□□□□□ -0.52
APOC3P02656 TP53TG5-201ENST00000372726 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
APOC3P02656 IQSEC1-204ENST00000613206 3582 ntTSL 2 BASIC11.79□□□□□ -0.52
APOC3P02656 CASC4-202ENST00000345795 3764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
APOC3P02656 PDXDC2P-NPIPB14P-205ENST00000531894 4184 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
APOC3P02656 WASF3-201ENST00000335327 4790 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
APOC3P02656 MGAT4EP-201ENST00000330493 2810 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
APOC3P02656 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
APOC3P02656 MADD-204ENST00000395336 5942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
APOC3P02656 AKNA-202ENST00000307564 7380 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
APOC3P02656 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC11.79□□□□□ -0.52
APOC3P02656 GUCY1B3-202ENST00000502959 2255 ntTSL 2 BASIC11.79□□□□□ -0.52
APOC3P02656 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
APOC3P02656 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
APOC3P02656 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
APOC3P02656 CPNE4-201ENST00000429747 4184 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
APOC3P02656 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
APOC3P02656 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
APOC3P02656 RRBP1-203ENST00000377807 3792 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
APOC3P02656 PLAT-202ENST00000352041 2516 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
APOC3P02656 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
APOC3P02656 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
APOC3P02656 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
APOC3P02656 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
APOC3P02656 HMGA1P5-201ENST00000412453 271 ntBASIC11.79□□□□□ -0.52
APOC3P02656 SPDYE15P-201ENST00000424157 909 ntBASIC11.79□□□□□ -0.52
APOC3P02656 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC11.79□□□□□ -0.52
APOC3P02656 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
APOC3P02656 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms