Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-AP01891 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-AP01891 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
HLA-AP01891 HAL-202ENST00000538703 2637 ntTSL 2 BASIC12.54□□□□□ -0.4
HLA-AP01891 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
HLA-AP01891 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-AP01891 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-AP01891 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-AP01891 PTMS-202ENST00000389462 773 ntTSL 2 BASIC12.54□□□□□ -0.4
HLA-AP01891 AL627223.1-201ENST00000416693 442 ntBASIC12.54□□□□□ -0.4
HLA-AP01891 CNN2P11-201ENST00000429351 262 ntBASIC12.54□□□□□ -0.4
HLA-AP01891 HIST3H2BA-201ENST00000436555 524 ntBASIC12.54□□□□□ -0.4
HLA-AP01891 DNAJB3-202ENST00000449667 1266 ntBASIC12.54□□□□□ -0.4
HLA-AP01891 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-AP01891 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC12.54□□□□□ -0.4
HLA-AP01891 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC12.54□□□□□ -0.4
HLA-AP01891 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-AP01891 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.54□□□□□ -0.4
HLA-AP01891 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
HLA-AP01891 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC12.54□□□□□ -0.4
HLA-AP01891 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC12.54□□□□□ -0.4
HLA-AP01891 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
HLA-AP01891 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
HLA-AP01891 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC12.54□□□□□ -0.4
HLA-AP01891 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-AP01891 AC004835.2-201ENST00000603762 682 ntBASIC12.54□□□□□ -0.4
HLA-AP01891 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC12.54□□□□□ -0.4
HLA-AP01891 AC084121.4-201ENST00000641598 221 ntBASIC12.54□□□□□ -0.4
HLA-AP01891 AF228730.8-201ENST00000642140 221 ntBASIC12.54□□□□□ -0.4
HLA-AP01891 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-AP01891 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
HLA-AP01891 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-AP01891 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-AP01891 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-AP01891 AL360270.3-201ENST00000609118 1348 ntBASIC12.54□□□□□ -0.4
HLA-AP01891 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-AP01891 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-AP01891 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-AP01891 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-AP01891 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC12.54□□□□□ -0.4
HLA-AP01891 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-AP01891 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC12.54□□□□□ -0.4
HLA-AP01891 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-AP01891 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC12.54□□□□□ -0.4
HLA-AP01891 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-AP01891 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
HLA-AP01891 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC12.54□□□□□ -0.4
HLA-AP01891 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-AP01891 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-AP01891 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC12.54□□□□□ -0.4
HLA-AP01891 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-AP01891 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-AP01891 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC12.53□□□□□ -0.4
HLA-AP01891 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-AP01891 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC12.53□□□□□ -0.4
HLA-AP01891 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-AP01891 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-AP01891 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-AP01891 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC12.53□□□□□ -0.4
HLA-AP01891 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC12.53□□□□□ -0.4
HLA-AP01891 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-AP01891 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.53□□□□□ -0.4
HLA-AP01891 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-AP01891 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-AP01891 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-AP01891 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-AP01891 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-AP01891 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-AP01891 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-AP01891 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-AP01891 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-AP01891 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-AP01891 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-AP01891 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-AP01891 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC12.53□□□□□ -0.4
HLA-AP01891 AL157414.3-201ENST00000624276 1954 ntBASIC12.53□□□□□ -0.4
HLA-AP01891 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC12.53□□□□□ -0.4
HLA-AP01891 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-AP01891 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-AP01891 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
HLA-AP01891 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-AP01891 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
HLA-AP01891 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC12.53□□□□□ -0.4
HLA-AP01891 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-AP01891 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC12.53□□□□□ -0.4
HLA-AP01891 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-AP01891 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC12.53□□□□□ -0.4
HLA-AP01891 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-AP01891 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC12.53□□□□□ -0.4
HLA-AP01891 AP000344.2-201ENST00000512987 629 ntBASIC12.53□□□□□ -0.4
HLA-AP01891 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-AP01891 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC12.53□□□□□ -0.4
HLA-AP01891 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC12.53□□□□□ -0.4
HLA-AP01891 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-AP01891 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC12.53□□□□□ -0.4
HLA-AP01891 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC12.53□□□□□ -0.4
HLA-AP01891 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-AP01891 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC12.53□□□□□ -0.4
HLA-AP01891 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-AP01891 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms