Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 AC023274.1-201ENST00000418278 595 ntBASIC11.13□□□□□ -0.63
SNAI2O43623 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC11.13□□□□□ -0.63
SNAI2O43623 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
SNAI2O43623 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC11.13□□□□□ -0.63
SNAI2O43623 SERBP1P3-201ENST00000459980 809 ntBASIC11.13□□□□□ -0.63
SNAI2O43623 PP7080-204ENST00000510714 601 ntTSL 3 BASIC11.13□□□□□ -0.63
SNAI2O43623 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC11.13□□□□□ -0.63
SNAI2O43623 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SNAI2O43623 AL079307.3-201ENST00000556114 283 ntBASIC11.13□□□□□ -0.63
SNAI2O43623 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC11.13□□□□□ -0.63
SNAI2O43623 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC11.13□□□□□ -0.63
SNAI2O43623 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC11.13□□□□□ -0.63
SNAI2O43623 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC11.13□□□□□ -0.63
SNAI2O43623 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC11.13□□□□□ -0.63
SNAI2O43623 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
SNAI2O43623 RIMS1-201ENST00000264839 7055 ntTSL 5 BASIC11.13□□□□□ -0.63
SNAI2O43623 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC11.13□□□□□ -0.63
SNAI2O43623 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SNAI2O43623 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC11.13□□□□□ -0.63
SNAI2O43623 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC11.13□□□□□ -0.63
SNAI2O43623 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC11.13□□□□□ -0.63
SNAI2O43623 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SNAI2O43623 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC11.13□□□□□ -0.63
SNAI2O43623 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
SNAI2O43623 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
SNAI2O43623 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC11.13□□□□□ -0.63
SNAI2O43623 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
SNAI2O43623 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SNAI2O43623 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SNAI2O43623 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC11.13□□□□□ -0.63
SNAI2O43623 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SNAI2O43623 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
SNAI2O43623 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SNAI2O43623 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SNAI2O43623 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SNAI2O43623 AL365181.3-201ENST00000605886 3222 ntBASIC11.13□□□□□ -0.63
SNAI2O43623 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SNAI2O43623 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SNAI2O43623 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
SNAI2O43623 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC11.12□□□□□ -0.63
SNAI2O43623 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SNAI2O43623 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SNAI2O43623 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SNAI2O43623 AL360270.3-201ENST00000609118 1348 ntBASIC11.12□□□□□ -0.63
SNAI2O43623 MIER2-201ENST00000264819 6884 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SNAI2O43623 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
SNAI2O43623 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
SNAI2O43623 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC11.12□□□□□ -0.63
SNAI2O43623 PCDHA5-203ENST00000614258 4248 ntBASIC11.12□□□□□ -0.63
SNAI2O43623 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SNAI2O43623 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SNAI2O43623 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SNAI2O43623 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
SNAI2O43623 MVK-214ENST00000629016 1591 ntTSL 5 BASIC11.12□□□□□ -0.63
SNAI2O43623 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
SNAI2O43623 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SNAI2O43623 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SNAI2O43623 AC007614.4-201ENST00000564048 1827 ntBASIC11.12□□□□□ -0.63
SNAI2O43623 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC11.12□□□□□ -0.63
SNAI2O43623 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SNAI2O43623 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SNAI2O43623 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SNAI2O43623 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
SNAI2O43623 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
SNAI2O43623 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
SNAI2O43623 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SNAI2O43623 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
SNAI2O43623 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SNAI2O43623 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
SNAI2O43623 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC11.12□□□□□ -0.63
SNAI2O43623 KRT18P32-201ENST00000424695 1287 ntBASIC11.12□□□□□ -0.63
SNAI2O43623 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC11.12□□□□□ -0.63
SNAI2O43623 MTND6P24-201ENST00000440466 518 ntBASIC11.12□□□□□ -0.63
SNAI2O43623 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SNAI2O43623 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SNAI2O43623 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC11.12□□□□□ -0.63
SNAI2O43623 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC11.12□□□□□ -0.63
SNAI2O43623 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC11.12□□□□□ -0.63
SNAI2O43623 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC11.12□□□□□ -0.63
SNAI2O43623 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC11.12□□□□□ -0.63
SNAI2O43623 AC040169.1-201ENST00000565382 521 ntBASIC11.12□□□□□ -0.63
SNAI2O43623 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
SNAI2O43623 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SNAI2O43623 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
SNAI2O43623 LINC00628-201ENST00000628516 1289 ntBASIC11.12□□□□□ -0.63
SNAI2O43623 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC11.12□□□□□ -0.63
SNAI2O43623 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC11.12□□□□□ -0.63
SNAI2O43623 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SNAI2O43623 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC11.12□□□□□ -0.63
SNAI2O43623 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
SNAI2O43623 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
SNAI2O43623 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SNAI2O43623 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC11.12□□□□□ -0.63
SNAI2O43623 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SNAI2O43623 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SNAI2O43623 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SNAI2O43623 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SNAI2O43623 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
SNAI2O43623 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC11.12□□□□□ -0.63
SNAI2O43623 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms