Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RIPK2O43353 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RIPK2O43353 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC15.01□□□□□ -0.01
RIPK2O43353 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC15.01□□□□□ -0.01
RIPK2O43353 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RIPK2O43353 BTBD7P1-201ENST00000447253 1453 ntBASIC15.01□□□□□ -0.01
RIPK2O43353 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RIPK2O43353 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RIPK2O43353 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RIPK2O43353 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RIPK2O43353 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RIPK2O43353 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC15.01□□□□□ -0.01
RIPK2O43353 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC15.01□□□□□ -0.01
RIPK2O43353 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC15□□□□□ -0.01
RIPK2O43353 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC15□□□□□ -0.01
RIPK2O43353 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
RIPK2O43353 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
RIPK2O43353 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15□□□□□ -0.01
RIPK2O43353 NCLP1-201ENST00000445357 1963 ntBASIC15□□□□□ -0.01
RIPK2O43353 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
RIPK2O43353 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RIPK2O43353 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RIPK2O43353 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15□□□□□ -0.01
RIPK2O43353 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC15□□□□□ -0.01
RIPK2O43353 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15□□□□□ -0.01
RIPK2O43353 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RIPK2O43353 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
RIPK2O43353 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
RIPK2O43353 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RIPK2O43353 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15□□□□□ -0.01
RIPK2O43353 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RIPK2O43353 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
RIPK2O43353 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
RIPK2O43353 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
RIPK2O43353 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RIPK2O43353 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RIPK2O43353 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15□□□□□ -0.01
RIPK2O43353 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15□□□□□ -0.01
RIPK2O43353 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15□□□□□ -0.01
RIPK2O43353 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15□□□□□ -0.01
RIPK2O43353 RPSAP43-201ENST00000402237 625 ntBASIC15□□□□□ -0.01
RIPK2O43353 AC211486.1-202ENST00000416371 468 ntBASIC15□□□□□ -0.01
RIPK2O43353 AC254562.1-201ENST00000417586 456 ntBASIC15□□□□□ -0.01
RIPK2O43353 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15□□□□□ -0.01
RIPK2O43353 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
RIPK2O43353 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15□□□□□ -0.01
RIPK2O43353 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15□□□□□ -0.01
RIPK2O43353 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15□□□□□ -0.01
RIPK2O43353 HNRNPA3P5-201ENST00000455201 833 ntBASIC15□□□□□ -0.01
RIPK2O43353 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
RIPK2O43353 AC211476.1-201ENST00000503899 468 ntBASIC15□□□□□ -0.01
RIPK2O43353 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15□□□□□ -0.01
RIPK2O43353 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15□□□□□ -0.01
RIPK2O43353 SORD2P-201ENST00000558556 1069 ntBASIC15□□□□□ -0.01
RIPK2O43353 AC103988.2-201ENST00000561804 725 ntBASIC15□□□□□ -0.01
RIPK2O43353 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC15□□□□□ -0.01
RIPK2O43353 RARRES2P5-201ENST00000564013 466 ntBASIC15□□□□□ -0.01
RIPK2O43353 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15□□□□□ -0.01
RIPK2O43353 SRD5A3P1-201ENST00000603021 949 ntBASIC15□□□□□ -0.01
RIPK2O43353 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15□□□□□ -0.01
RIPK2O43353 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
RIPK2O43353 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
RIPK2O43353 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RIPK2O43353 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
RIPK2O43353 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RIPK2O43353 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RIPK2O43353 AC100757.3-201ENST00000622361 1406 ntBASIC15□□□□□ -0.01
RIPK2O43353 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC15□□□□□ -0.01
RIPK2O43353 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
RIPK2O43353 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
RIPK2O43353 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
RIPK2O43353 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RIPK2O43353 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RIPK2O43353 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RIPK2O43353 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
RIPK2O43353 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RIPK2O43353 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC14.99□□□□□ -0.01
RIPK2O43353 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
RIPK2O43353 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RIPK2O43353 AL138725.1-201ENST00000407347 1314 ntBASIC14.99□□□□□ -0.01
RIPK2O43353 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
RIPK2O43353 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
RIPK2O43353 KHSRPP1-201ENST00000427983 1768 ntBASIC14.99□□□□□ -0.01
RIPK2O43353 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
RIPK2O43353 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.99□□□□□ -0.01
RIPK2O43353 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RIPK2O43353 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
RIPK2O43353 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RIPK2O43353 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.99□□□□□ -0.01
RIPK2O43353 CNN2P11-201ENST00000429351 262 ntBASIC14.99□□□□□ -0.01
RIPK2O43353 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.99□□□□□ -0.01
RIPK2O43353 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.99□□□□□ -0.01
RIPK2O43353 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.99□□□□□ -0.01
RIPK2O43353 KLF2P3-201ENST00000451977 1087 ntBASIC14.99□□□□□ -0.01
RIPK2O43353 AC009477.1-201ENST00000452936 217 ntBASIC14.99□□□□□ -0.01
RIPK2O43353 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.99□□□□□ -0.01
RIPK2O43353 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.99□□□□□ -0.01
RIPK2O43353 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.99□□□□□ -0.01
RIPK2O43353 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.99□□□□□ -0.01
RIPK2O43353 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms