Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
PAX4O43316 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
PAX4O43316 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC10.67□□□□□ -0.7
PAX4O43316 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
PAX4O43316 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
PAX4O43316 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
PAX4O43316 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PAX4O43316 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PAX4O43316 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
PAX4O43316 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
PAX4O43316 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
PAX4O43316 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
PAX4O43316 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
PAX4O43316 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC10.66□□□□□ -0.7
PAX4O43316 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC10.66□□□□□ -0.7
PAX4O43316 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PAX4O43316 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
PAX4O43316 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
PAX4O43316 LINC00528-201ENST00000600723 2160 ntBASIC10.66□□□□□ -0.7
PAX4O43316 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PAX4O43316 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC10.66□□□□□ -0.7
PAX4O43316 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PAX4O43316 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PAX4O43316 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC10.66□□□□□ -0.7
PAX4O43316 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
PAX4O43316 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PAX4O43316 AC134312.5-201ENST00000568031 1313 ntBASIC10.66□□□□□ -0.7
PAX4O43316 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
PAX4O43316 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PAX4O43316 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
PAX4O43316 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PAX4O43316 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
PAX4O43316 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
PAX4O43316 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
PAX4O43316 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC10.66□□□□□ -0.7
PAX4O43316 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
PAX4O43316 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PAX4O43316 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
PAX4O43316 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
PAX4O43316 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
PAX4O43316 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PAX4O43316 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC10.66□□□□□ -0.7
PAX4O43316 BAATP1-201ENST00000412284 1225 ntBASIC10.66□□□□□ -0.7
PAX4O43316 HLA-K-203ENST00000430151 1046 ntBASIC10.66□□□□□ -0.7
PAX4O43316 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC10.66□□□□□ -0.7
PAX4O43316 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC10.66□□□□□ -0.7
PAX4O43316 TTTY14-204ENST00000452584 860 ntTSL 3 BASIC10.66□□□□□ -0.7
PAX4O43316 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
PAX4O43316 AC007688.1-201ENST00000475592 759 ntBASIC10.66□□□□□ -0.7
PAX4O43316 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC10.66□□□□□ -0.7
PAX4O43316 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC10.66□□□□□ -0.7
PAX4O43316 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC10.66□□□□□ -0.7
PAX4O43316 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
PAX4O43316 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC10.66□□□□□ -0.7
PAX4O43316 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC10.66□□□□□ -0.7
PAX4O43316 AL596325.1-201ENST00000563991 1082 ntBASIC10.66□□□□□ -0.7
PAX4O43316 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
PAX4O43316 CLUHP6-201ENST00000580789 941 ntBASIC10.66□□□□□ -0.7
PAX4O43316 AL353729.2-201ENST00000605859 1249 ntBASIC10.66□□□□□ -0.7
PAX4O43316 CECR7-204ENST00000609932 568 ntTSL 2 BASIC10.66□□□□□ -0.7
PAX4O43316 AC027348.2-201ENST00000624375 642 ntBASIC10.66□□□□□ -0.7
PAX4O43316 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC10.66□□□□□ -0.7
PAX4O43316 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC10.66□□□□□ -0.7
PAX4O43316 AL603764.1-201ENST00000636452 321 ntBASIC10.66□□□□□ -0.7
PAX4O43316 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PAX4O43316 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PAX4O43316 USE1-206ENST00000595101 1776 ntTSL 2 BASIC10.66□□□□□ -0.7
PAX4O43316 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC10.66□□□□□ -0.7
PAX4O43316 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
PAX4O43316 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PAX4O43316 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC10.66□□□□□ -0.7
PAX4O43316 AC005089.1-201ENST00000619486 2241 ntBASIC10.66□□□□□ -0.7
PAX4O43316 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
PAX4O43316 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PAX4O43316 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PAX4O43316 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC10.66□□□□□ -0.7
PAX4O43316 ARID4A-202ENST00000355431 5891 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PAX4O43316 HS3ST1-201ENST00000002596 8031 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PAX4O43316 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
PAX4O43316 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
PAX4O43316 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PAX4O43316 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
PAX4O43316 C5AR2-201ENST00000595464 6746 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PAX4O43316 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PAX4O43316 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC10.66□□□□□ -0.7
PAX4O43316 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC10.66□□□□□ -0.7
PAX4O43316 CU639417.3-201ENST00000624240 1404 ntBASIC10.66□□□□□ -0.7
PAX4O43316 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC10.66□□□□□ -0.7
PAX4O43316 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
PAX4O43316 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PAX4O43316 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC10.65□□□□□ -0.7
PAX4O43316 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
PAX4O43316 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
PAX4O43316 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
PAX4O43316 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
PAX4O43316 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
PAX4O43316 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
PAX4O43316 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
PAX4O43316 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC10.65□□□□□ -0.7
PAX4O43316 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC10.65□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms