Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
UPK1AO00322 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UPK1AO00322 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
UPK1AO00322 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UPK1AO00322 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
UPK1AO00322 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
UPK1AO00322 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UPK1AO00322 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC13.99□□□□□ -0.17
UPK1AO00322 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.99□□□□□ -0.17
UPK1AO00322 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.99□□□□□ -0.17
UPK1AO00322 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.99□□□□□ -0.17
UPK1AO00322 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.99□□□□□ -0.17
UPK1AO00322 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.99□□□□□ -0.17
UPK1AO00322 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
UPK1AO00322 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.99□□□□□ -0.17
UPK1AO00322 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.99□□□□□ -0.17
UPK1AO00322 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.99□□□□□ -0.17
UPK1AO00322 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
UPK1AO00322 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UPK1AO00322 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.99□□□□□ -0.17
UPK1AO00322 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.99□□□□□ -0.17
UPK1AO00322 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
UPK1AO00322 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UPK1AO00322 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
UPK1AO00322 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UPK1AO00322 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC13.99□□□□□ -0.17
UPK1AO00322 NUTM2HP-201ENST00000442076 2498 ntBASIC13.99□□□□□ -0.17
UPK1AO00322 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.99□□□□□ -0.17
UPK1AO00322 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
UPK1AO00322 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.99□□□□□ -0.17
UPK1AO00322 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UPK1AO00322 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
UPK1AO00322 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.99□□□□□ -0.17
UPK1AO00322 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UPK1AO00322 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.98□□□□□ -0.17
UPK1AO00322 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UPK1AO00322 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
UPK1AO00322 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.98□□□□□ -0.17
UPK1AO00322 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
UPK1AO00322 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
UPK1AO00322 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
UPK1AO00322 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
UPK1AO00322 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
UPK1AO00322 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
UPK1AO00322 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.98□□□□□ -0.17
UPK1AO00322 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.98□□□□□ -0.17
UPK1AO00322 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.98□□□□□ -0.17
UPK1AO00322 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
UPK1AO00322 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.98□□□□□ -0.17
UPK1AO00322 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
UPK1AO00322 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UPK1AO00322 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.98□□□□□ -0.17
UPK1AO00322 CLUHP2-201ENST00000426660 1303 ntBASIC13.98□□□□□ -0.17
UPK1AO00322 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.98□□□□□ -0.17
UPK1AO00322 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
UPK1AO00322 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
UPK1AO00322 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UPK1AO00322 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UPK1AO00322 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
UPK1AO00322 AC005229.1-201ENST00000392885 409 ntBASIC13.98□□□□□ -0.17
UPK1AO00322 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UPK1AO00322 AL512384.1-201ENST00000406683 331 ntBASIC13.98□□□□□ -0.17
UPK1AO00322 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.98□□□□□ -0.17
UPK1AO00322 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC13.98□□□□□ -0.17
UPK1AO00322 POM121L8P-201ENST00000417732 1281 ntBASIC13.98□□□□□ -0.17
UPK1AO00322 PNKD-204ENST00000436005 978 ntTSL 5 BASIC13.98□□□□□ -0.17
UPK1AO00322 POM121L9P-203ENST00000441984 1285 ntBASIC13.98□□□□□ -0.17
UPK1AO00322 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.98□□□□□ -0.17
UPK1AO00322 AL355864.2-201ENST00000447420 863 ntBASIC13.98□□□□□ -0.17
UPK1AO00322 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.98□□□□□ -0.17
UPK1AO00322 TAF8-206ENST00000472818 719 ntTSL 2 BASIC13.98□□□□□ -0.17
UPK1AO00322 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.98□□□□□ -0.17
UPK1AO00322 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UPK1AO00322 FUZ-207ENST00000526575 482 ntTSL 4 BASIC13.98□□□□□ -0.17
UPK1AO00322 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
UPK1AO00322 SLC25A47P1-201ENST00000531577 414 ntBASIC13.98□□□□□ -0.17
UPK1AO00322 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.98□□□□□ -0.17
UPK1AO00322 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.98□□□□□ -0.17
UPK1AO00322 AC132938.2-201ENST00000579188 680 ntBASIC13.98□□□□□ -0.17
UPK1AO00322 RN7SL48P-201ENST00000579283 293 ntBASIC13.98□□□□□ -0.17
UPK1AO00322 GNRHR2-203ENST00000581100 1187 ntBASIC13.98□□□□□ -0.17
UPK1AO00322 AC015936.2-201ENST00000593177 259 ntBASIC13.98□□□□□ -0.17
UPK1AO00322 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.98□□□□□ -0.17
UPK1AO00322 ENPP7P14-201ENST00000621765 1040 ntBASIC13.98□□□□□ -0.17
UPK1AO00322 AL358472.5-202ENST00000641448 1267 ntBASIC13.98□□□□□ -0.17
UPK1AO00322 AL591163.1-201ENST00000641757 987 ntBASIC13.98□□□□□ -0.17
UPK1AO00322 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UPK1AO00322 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.98□□□□□ -0.17
UPK1AO00322 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
UPK1AO00322 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UPK1AO00322 FAM90A12P-201ENST00000519497 2375 ntBASIC13.98□□□□□ -0.17
UPK1AO00322 FAM90A24P-201ENST00000520792 2369 ntBASIC13.98□□□□□ -0.17
UPK1AO00322 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
UPK1AO00322 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UPK1AO00322 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
UPK1AO00322 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
UPK1AO00322 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UPK1AO00322 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.98□□□□□ -0.17
UPK1AO00322 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
UPK1AO00322 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 219.8 ms