Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDC7O00311 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.49□□□□□ -0.09
CDC7O00311 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.49□□□□□ -0.09
CDC7O00311 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.49□□□□□ -0.09
CDC7O00311 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.49□□□□□ -0.09
CDC7O00311 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDC7O00311 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDC7O00311 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
CDC7O00311 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDC7O00311 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDC7O00311 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDC7O00311 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDC7O00311 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.49□□□□□ -0.09
CDC7O00311 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDC7O00311 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDC7O00311 AL512384.1-201ENST00000406683 331 ntBASIC14.49□□□□□ -0.09
CDC7O00311 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.49□□□□□ -0.09
CDC7O00311 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.49□□□□□ -0.09
CDC7O00311 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDC7O00311 FAM197Y7-201ENST00000432892 766 ntBASIC14.49□□□□□ -0.09
CDC7O00311 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDC7O00311 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDC7O00311 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.49□□□□□ -0.09
CDC7O00311 FTH1P14-201ENST00000482930 551 ntBASIC14.49□□□□□ -0.09
CDC7O00311 RNA5SP486-201ENST00000515961 83 ntBASIC14.49□□□□□ -0.09
CDC7O00311 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.49□□□□□ -0.09
CDC7O00311 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.49□□□□□ -0.09
CDC7O00311 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.49□□□□□ -0.09
CDC7O00311 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC14.49□□□□□ -0.09
CDC7O00311 AC015936.2-201ENST00000593177 259 ntBASIC14.49□□□□□ -0.09
CDC7O00311 OR10B1P-201ENST00000601666 907 ntBASIC14.49□□□□□ -0.09
CDC7O00311 IGHV3-72-202ENST00000621503 303 ntBASIC14.49□□□□□ -0.09
CDC7O00311 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.49□□□□□ -0.09
CDC7O00311 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.49□□□□□ -0.09
CDC7O00311 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDC7O00311 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.49□□□□□ -0.09
CDC7O00311 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
CDC7O00311 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDC7O00311 AC020910.6-201ENST00000623084 1459 ntBASIC14.49□□□□□ -0.09
CDC7O00311 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.49□□□□□ -0.09
CDC7O00311 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDC7O00311 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDC7O00311 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDC7O00311 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.49□□□□□ -0.09
CDC7O00311 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDC7O00311 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDC7O00311 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDC7O00311 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDC7O00311 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDC7O00311 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDC7O00311 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
CDC7O00311 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.48□□□□□ -0.09
CDC7O00311 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.48□□□□□ -0.09
CDC7O00311 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDC7O00311 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDC7O00311 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDC7O00311 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.48□□□□□ -0.09
CDC7O00311 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.48□□□□□ -0.09
CDC7O00311 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDC7O00311 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
CDC7O00311 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDC7O00311 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.48□□□□□ -0.09
CDC7O00311 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.48□□□□□ -0.09
CDC7O00311 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.48□□□□□ -0.09
CDC7O00311 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDC7O00311 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDC7O00311 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDC7O00311 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDC7O00311 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.48□□□□□ -0.09
CDC7O00311 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
CDC7O00311 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDC7O00311 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDC7O00311 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.48□□□□□ -0.09
CDC7O00311 C2orf27AP3-201ENST00000434123 579 ntBASIC14.48□□□□□ -0.09
CDC7O00311 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.48□□□□□ -0.09
CDC7O00311 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14.48□□□□□ -0.09
CDC7O00311 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CDC7O00311 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
CDC7O00311 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.48□□□□□ -0.09
CDC7O00311 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.48□□□□□ -0.09
CDC7O00311 BTNL10-201ENST00000595971 695 ntBASIC14.48□□□□□ -0.09
CDC7O00311 AC233724.13-201ENST00000598383 410 ntBASIC14.48□□□□□ -0.09
CDC7O00311 AL354718.3-201ENST00000616414 581 ntBASIC14.48□□□□□ -0.09
CDC7O00311 CR382287.1-201ENST00000623954 586 ntBASIC14.48□□□□□ -0.09
CDC7O00311 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.48□□□□□ -0.09
CDC7O00311 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDC7O00311 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDC7O00311 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.48□□□□□ -0.09
CDC7O00311 AC067750.1-201ENST00000608826 6545 ntBASIC14.48□□□□□ -0.09
CDC7O00311 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDC7O00311 F10-203ENST00000409306 1450 ntTSL 3 BASIC14.48□□□□□ -0.09
CDC7O00311 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDC7O00311 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.48□□□□□ -0.09
CDC7O00311 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDC7O00311 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDC7O00311 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDC7O00311 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDC7O00311 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDC7O00311 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.48□□□□□ -0.09
CDC7O00311 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms