Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AC072061.1-201ENST00000569710 2234 ntBASIC15.36■□□□□ 0.05
CCDC188H7C350 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC15.36■□□□□ 0.05
CCDC188H7C350 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC188H7C350 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC188H7C350 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC188H7C350 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC188H7C350 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC188H7C350 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC188H7C350 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC15.36■□□□□ 0.05
CCDC188H7C350 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC188H7C350 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC188H7C350 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC188H7C350 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC188H7C350 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.36■□□□□ 0.05
CCDC188H7C350 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC188H7C350 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.36■□□□□ 0.05
CCDC188H7C350 BX842568.4-201ENST00000421222 227 ntBASIC15.36■□□□□ 0.05
CCDC188H7C350 TSEN15P1-201ENST00000423257 515 ntBASIC15.36■□□□□ 0.05
CCDC188H7C350 TSSK5P-201ENST00000423978 907 ntBASIC15.36■□□□□ 0.05
CCDC188H7C350 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.36■□□□□ 0.05
CCDC188H7C350 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC188H7C350 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC188H7C350 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.36■□□□□ 0.05
CCDC188H7C350 AC067863.1-201ENST00000494933 530 ntBASIC15.36■□□□□ 0.05
CCDC188H7C350 SPDYE18-201ENST00000510091 1050 ntBASIC15.36■□□□□ 0.05
CCDC188H7C350 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.36■□□□□ 0.05
CCDC188H7C350 AC025678.2-201ENST00000562061 970 ntBASIC15.36■□□□□ 0.05
CCDC188H7C350 SNHG9-202ENST00000564014 471 ntBASIC15.36■□□□□ 0.05
CCDC188H7C350 AC009407.1-201ENST00000568958 598 ntBASIC15.36■□□□□ 0.05
CCDC188H7C350 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.36■□□□□ 0.05
CCDC188H7C350 AP001002.3-201ENST00000623482 206 ntBASIC15.36■□□□□ 0.05
CCDC188H7C350 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC188H7C350 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC15.36■□□□□ 0.05
CCDC188H7C350 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
CCDC188H7C350 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC188H7C350 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC188H7C350 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
CCDC188H7C350 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC188H7C350 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC188H7C350 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CCDC188H7C350 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC188H7C350 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC15.36■□□□□ 0.05
CCDC188H7C350 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC188H7C350 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC188H7C350 INTS4P2-202ENST00000614726 2019 ntBASIC15.36■□□□□ 0.05
CCDC188H7C350 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC188H7C350 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC15.36■□□□□ 0.05
CCDC188H7C350 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC188H7C350 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC188H7C350 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC188H7C350 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC188H7C350 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CCDC188H7C350 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC15.35■□□□□ 0.05
CCDC188H7C350 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC188H7C350 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC15.35■□□□□ 0.05
CCDC188H7C350 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CCDC188H7C350 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CCDC188H7C350 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.35■□□□□ 0.05
CCDC188H7C350 AC068760.1-201ENST00000493579 1953 ntBASIC15.35■□□□□ 0.05
CCDC188H7C350 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC188H7C350 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CCDC188H7C350 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CCDC188H7C350 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC188H7C350 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CCDC188H7C350 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC188H7C350 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC188H7C350 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC188H7C350 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CCDC188H7C350 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.35■□□□□ 0.05
CCDC188H7C350 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC188H7C350 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC188H7C350 KLF2P2-201ENST00000416807 1039 ntBASIC15.35■□□□□ 0.05
CCDC188H7C350 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC188H7C350 AC241585.1-201ENST00000433527 519 ntBASIC15.35■□□□□ 0.05
CCDC188H7C350 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.35■□□□□ 0.05
CCDC188H7C350 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.35■□□□□ 0.05
CCDC188H7C350 AC120045.2-201ENST00000567334 178 ntBASIC15.35■□□□□ 0.05
CCDC188H7C350 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC188H7C350 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
CCDC188H7C350 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.35■□□□□ 0.05
CCDC188H7C350 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.35■□□□□ 0.05
CCDC188H7C350 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC188H7C350 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.35■□□□□ 0.05
CCDC188H7C350 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC188H7C350 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC15.35■□□□□ 0.05
CCDC188H7C350 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC188H7C350 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC188H7C350 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC188H7C350 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CCDC188H7C350 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC188H7C350 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC15.35■□□□□ 0.05
CCDC188H7C350 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC15.35■□□□□ 0.05
CCDC188H7C350 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC188H7C350 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC188H7C350 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC15.35■□□□□ 0.05
CCDC188H7C350 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC188H7C350 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC188H7C350 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC188H7C350 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC188H7C350 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms