Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 AL158211.2-201ENST00000607282 395 ntBASIC15.7■□□□□ 0.1
RCCD1A6NED2 AC099568.2-201ENST00000609194 695 ntBASIC15.7■□□□□ 0.1
RCCD1A6NED2 AP005019.2-201ENST00000615104 511 ntBASIC15.7■□□□□ 0.1
RCCD1A6NED2 AC093512.1-201ENST00000617969 520 ntBASIC15.7■□□□□ 0.1
RCCD1A6NED2 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RCCD1A6NED2 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RCCD1A6NED2 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RCCD1A6NED2 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RCCD1A6NED2 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RCCD1A6NED2 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC15.7■□□□□ 0.1
RCCD1A6NED2 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.7■□□□□ 0.1
RCCD1A6NED2 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.7■□□□□ 0.1
RCCD1A6NED2 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RCCD1A6NED2 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RCCD1A6NED2 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RCCD1A6NED2 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RCCD1A6NED2 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RCCD1A6NED2 AL590440.2-201ENST00000641973 1595 ntBASIC15.7■□□□□ 0.1
RCCD1A6NED2 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RCCD1A6NED2 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RCCD1A6NED2 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RCCD1A6NED2 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RCCD1A6NED2 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RCCD1A6NED2 ST20-AS1-201ENST00000560255 4223 ntBASIC15.7■□□□□ 0.1
RCCD1A6NED2 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RCCD1A6NED2 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC15.69■□□□□ 0.1
RCCD1A6NED2 CLUHP2-201ENST00000426660 1303 ntBASIC15.69■□□□□ 0.1
RCCD1A6NED2 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RCCD1A6NED2 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RCCD1A6NED2 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RCCD1A6NED2 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC15.69■□□□□ 0.1
RCCD1A6NED2 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
RCCD1A6NED2 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RCCD1A6NED2 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RCCD1A6NED2 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
RCCD1A6NED2 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RCCD1A6NED2 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RCCD1A6NED2 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RCCD1A6NED2 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
RCCD1A6NED2 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RCCD1A6NED2 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.69■□□□□ 0.1
RCCD1A6NED2 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RCCD1A6NED2 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RCCD1A6NED2 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.69■□□□□ 0.1
RCCD1A6NED2 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RCCD1A6NED2 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RCCD1A6NED2 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RCCD1A6NED2 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RCCD1A6NED2 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RCCD1A6NED2 PTENP1-202ENST00000532280 3996 ntBASIC15.69■□□□□ 0.1
RCCD1A6NED2 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RCCD1A6NED2 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RCCD1A6NED2 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC15.69■□□□□ 0.1
RCCD1A6NED2 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RCCD1A6NED2 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RCCD1A6NED2 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
RCCD1A6NED2 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RCCD1A6NED2 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RCCD1A6NED2 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RCCD1A6NED2 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RCCD1A6NED2 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RCCD1A6NED2 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.69■□□□□ 0.1
RCCD1A6NED2 MEP1AP4-201ENST00000423244 1087 ntBASIC15.69■□□□□ 0.1
RCCD1A6NED2 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.69■□□□□ 0.1
RCCD1A6NED2 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.69■□□□□ 0.1
RCCD1A6NED2 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RCCD1A6NED2 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RCCD1A6NED2 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.69■□□□□ 0.1
RCCD1A6NED2 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.69■□□□□ 0.1
RCCD1A6NED2 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.69■□□□□ 0.1
RCCD1A6NED2 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
RCCD1A6NED2 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
RCCD1A6NED2 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RCCD1A6NED2 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RCCD1A6NED2 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RCCD1A6NED2 AC005562.1-201ENST00000583030 3219 ntBASIC15.69■□□□□ 0.1
RCCD1A6NED2 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC15.69■□□□□ 0.1
RCCD1A6NED2 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RCCD1A6NED2 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RCCD1A6NED2 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
RCCD1A6NED2 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RCCD1A6NED2 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RCCD1A6NED2 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
RCCD1A6NED2 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC15.68■□□□□ 0.1
RCCD1A6NED2 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RCCD1A6NED2 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RCCD1A6NED2 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC15.68■□□□□ 0.1
RCCD1A6NED2 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
RCCD1A6NED2 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RCCD1A6NED2 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
RCCD1A6NED2 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RCCD1A6NED2 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
RCCD1A6NED2 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
RCCD1A6NED2 AL356585.2-201ENST00000625078 2396 ntBASIC15.68■□□□□ 0.1
RCCD1A6NED2 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
RCCD1A6NED2 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
RCCD1A6NED2 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
RCCD1A6NED2 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RCCD1A6NED2 IFNA1-201ENST00000276927 863 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
RCCD1A6NED2 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms