Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MBD3L3A6NE82 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
MBD3L3A6NE82 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
MBD3L3A6NE82 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC12.83□□□□□ -0.36
MBD3L3A6NE82 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
MBD3L3A6NE82 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.83□□□□□ -0.36
MBD3L3A6NE82 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MBD3L3A6NE82 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MBD3L3A6NE82 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC12.83□□□□□ -0.36
MBD3L3A6NE82 MIR557-201ENST00000385239 98 ntBASIC12.83□□□□□ -0.36
MBD3L3A6NE82 AL583805.1-201ENST00000391389 531 ntBASIC12.83□□□□□ -0.36
MBD3L3A6NE82 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MBD3L3A6NE82 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC12.83□□□□□ -0.36
MBD3L3A6NE82 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC12.83□□□□□ -0.36
MBD3L3A6NE82 FGFR3P1-201ENST00000449999 601 ntBASIC12.83□□□□□ -0.36
MBD3L3A6NE82 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC12.83□□□□□ -0.36
MBD3L3A6NE82 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC12.83□□□□□ -0.36
MBD3L3A6NE82 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC12.83□□□□□ -0.36
MBD3L3A6NE82 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC12.83□□□□□ -0.36
MBD3L3A6NE82 AC114947.1-202ENST00000514136 344 ntBASIC12.83□□□□□ -0.36
MBD3L3A6NE82 LY6E-208ENST00000520531 490 ntTSL 2 BASIC12.83□□□□□ -0.36
MBD3L3A6NE82 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
MBD3L3A6NE82 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC12.83□□□□□ -0.36
MBD3L3A6NE82 AC140658.4-201ENST00000561990 352 ntBASIC12.83□□□□□ -0.36
MBD3L3A6NE82 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC12.83□□□□□ -0.36
MBD3L3A6NE82 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC12.83□□□□□ -0.36
MBD3L3A6NE82 SPCS2P2-201ENST00000603270 608 ntBASIC12.83□□□□□ -0.36
MBD3L3A6NE82 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC12.83□□□□□ -0.36
MBD3L3A6NE82 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC12.83□□□□□ -0.36
MBD3L3A6NE82 AC007718.1-201ENST00000621078 280 ntBASIC12.83□□□□□ -0.36
MBD3L3A6NE82 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
MBD3L3A6NE82 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC12.83□□□□□ -0.36
MBD3L3A6NE82 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
MBD3L3A6NE82 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
MBD3L3A6NE82 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MBD3L3A6NE82 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MBD3L3A6NE82 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC12.83□□□□□ -0.36
MBD3L3A6NE82 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
MBD3L3A6NE82 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
MBD3L3A6NE82 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
MBD3L3A6NE82 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MBD3L3A6NE82 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC12.83□□□□□ -0.36
MBD3L3A6NE82 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MBD3L3A6NE82 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC12.83□□□□□ -0.36
MBD3L3A6NE82 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
MBD3L3A6NE82 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MBD3L3A6NE82 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MBD3L3A6NE82 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
MBD3L3A6NE82 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MBD3L3A6NE82 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC12.83□□□□□ -0.36
MBD3L3A6NE82 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC12.83□□□□□ -0.36
MBD3L3A6NE82 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MBD3L3A6NE82 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC12.83□□□□□ -0.36
MBD3L3A6NE82 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MBD3L3A6NE82 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC12.83□□□□□ -0.36
MBD3L3A6NE82 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
MBD3L3A6NE82 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC12.82□□□□□ -0.36
MBD3L3A6NE82 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
MBD3L3A6NE82 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
MBD3L3A6NE82 AGGF1P1-201ENST00000509500 2073 ntBASIC12.82□□□□□ -0.36
MBD3L3A6NE82 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
MBD3L3A6NE82 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC12.82□□□□□ -0.36
MBD3L3A6NE82 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
MBD3L3A6NE82 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
MBD3L3A6NE82 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
MBD3L3A6NE82 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
MBD3L3A6NE82 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC12.82□□□□□ -0.36
MBD3L3A6NE82 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC12.82□□□□□ -0.36
MBD3L3A6NE82 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
MBD3L3A6NE82 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC12.82□□□□□ -0.36
MBD3L3A6NE82 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC12.82□□□□□ -0.36
MBD3L3A6NE82 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
MBD3L3A6NE82 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
MBD3L3A6NE82 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
MBD3L3A6NE82 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
MBD3L3A6NE82 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
MBD3L3A6NE82 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
MBD3L3A6NE82 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
MBD3L3A6NE82 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
MBD3L3A6NE82 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC12.82□□□□□ -0.36
MBD3L3A6NE82 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
MBD3L3A6NE82 MPRIPP1-201ENST00000452433 1089 ntBASIC12.82□□□□□ -0.36
MBD3L3A6NE82 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC12.82□□□□□ -0.36
MBD3L3A6NE82 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC12.82□□□□□ -0.36
MBD3L3A6NE82 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
MBD3L3A6NE82 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC12.82□□□□□ -0.36
MBD3L3A6NE82 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
MBD3L3A6NE82 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
MBD3L3A6NE82 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC12.82□□□□□ -0.36
MBD3L3A6NE82 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC12.82□□□□□ -0.36
MBD3L3A6NE82 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC12.82□□□□□ -0.36
MBD3L3A6NE82 MIR6074-201ENST00000612054 107 ntBASIC12.82□□□□□ -0.36
MBD3L3A6NE82 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC12.82□□□□□ -0.36
MBD3L3A6NE82 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
MBD3L3A6NE82 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
MBD3L3A6NE82 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
MBD3L3A6NE82 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
MBD3L3A6NE82 LAP3P2-201ENST00000454686 1454 ntBASIC12.82□□□□□ -0.36
MBD3L3A6NE82 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
MBD3L3A6NE82 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms